Thamnophis sirtalis (common garter snake): 106540596
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Entry
106540596 CDS
T06107
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tsr04054
]
106540596
Pattern recognition receptors [BR:
tsr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
106540596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
LRR_1
LRR_9
TIR_2
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
106540596
NCBI-ProteinID:
XP_013911245
UniProt:
A0A6I9Y2Z9
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MWFFVFNQDQTVTSYTFNKCEIHNAFGNKTKVLCYNQKLLKVPTYLPTKLVFLDLSQNSI
PSLEKNDFKNFSRLQALNISQNKISKIEDGAFIHTSHLESLNLSANHLQLLSSSMFDGLM
NLTTLLLASNKIYRINPSAFANLENLKVIDLSSNKLYTLSAMHAVFNMRSLRELHIKDNG
LQNFSTKEIISAPPLLELDVSHNPISLVNITTPVLQRLLSLDLSFAIANDSILWEIEDSC
FLEGLKALYLGGIAMKPSEISKVIQMLNCSQLEIIHLNQLNINESDNLIEKVCQLHQQVQ
NLNFQGNKFTSIKAGAFENCTHLKLLNMSFNMLTRLPMASFQSLNSLHFISWTNNISTLV
PIITPNVSLLESLDLSFNEIKKITSDDFRYLNNLKAFYINGNKIDFVSSHNFDNLNNLQE
LNLGQNSLTTITQPFSGSLNKLEVLVLRRNNLETIEKGIFKNLSSLRFLNLADNRIDTIV
PGAFEGLNNLQILILGHNSIGAKPFRGDFFQGASSLADLDLFNNYISYESTKPLANPPFR
LLRSLKKLKINSQGGQGLKYFPVNFFEGLESIVQLHAGNLPISSLEPETFTFTPTLQELD
LSNNNFISLSNTLFHPISKLTELHLNRNKLNSLNFFLNANLSRLTLFRATGNVIDVITDE
QLSSLPSLLFLDLRQNNFICKCINQMFIQWSLQNPKTQVLHFYKYTCAFPPAYKGNLLWT
FNTSSCFIDYEFILFIANATAVFSLMLACFFYQWKLHMVYMFHLLLAYYIDKKQKRKGQG
TGYDYDAFLSYNTHDEKWVEDDLLPVLENQYGWKVCLHHRDFEPGRSILENIVDNIYASR
KTICIISRHYLESEWCSKEIQVASFRIFDDHKDVLVLIFLEDIPTEYLSPYHRMRKLLKT
KTYLKWPEDEQEIPLFWHKLNMAMKTGDGKEDENPVLAGFVPDEIP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtggttttttgtgtttaatcaagatcaaacagtaacttcttacacgttcaacaagtgt
gagatccataatgcctttgggaacaaaacaaaagttctatgctacaatcagaaattgtta
aaagttccaacctatctaccaactaaacttgtgtttttggatttatctcagaacagtatc
ccaagtctggagaagaatgacttcaagaacttcagccgtttgcaagctctcaacatttcc
caaaataaaataagtaaaattgaagatggtgctttcattcatacaagccacttggaatct
ttgaatcttagtgcaaatcatctgcagcttctctctagttctatgtttgatggacttatg
aatcttaccaccttactacttgccagcaataaaatatacaggatcaacccttctgccttt
gccaacttggagaatttaaaggtaattgatttatcttcaaataaactgtataccctgagt
gctatgcatgctgtctttaatatgagatctttaagagagttgcacatcaaagacaatggc
ttgcagaacttctcaaccaaagaaattattagtgcacctccattgcttgagctagatgta
tcccataatccaatttcccttgttaatattacaactccagttctacaaagacttttgtca
cttgatttatcttttgccattgccaacgactctattttatgggaaatagaagattcttgc
tttctggaaggcttaaaggcattatatttaggagggatagcaatgaagccatctgaaatc
tcaaaagtgatccaaatgctgaattgttcccagttagagattattcacttaaaccagtta
aatataaacgaatcagataatcttatagaaaaggtatgccaattgcaccagcaagttcaa
aatcttaactttcaaggcaataagttcacaagcatcaaggcaggggcttttgaaaattgc
acacatttaaagcttttgaatatgtcatttaacatgttgacaaggctaccaatggcatct
tttcaatcactgaattcgctgcattttatttcttggacaaacaacatatccactcttgtt
ccaattattacccctaatgtatcattattagaaagcctagatcttagctttaatgaaatc
aaaaaaattacttctgatgacttcagatatttaaataatttaaaggccttctacatcaat
ggaaacaagattgattttgtctcttcacataattttgataatctaaacaatttgcaagaa
ctaaatctagggcaaaattctttaacaacaatcacacaacctttctcaggaagcctaaat
aaactggaagtgttggtgctcaggcgcaataatttggaaactatagagaagggaattttt
aagaatctttcttctcttcggtttcttaatctggcagacaataggattgacacaatagta
ccaggagcttttgaaggcctgaacaacctacagattcttattcttggacataacagtata
ggtgcaaaaccttttcggggagacttttttcaaggggcaagctctttagcagaccttgat
ctttttaataattatatcagctatgaatccacaaaaccgcttgccaatccaccctttaga
cttttgagatctttaaagaaactaaagataaacagccagggtggccaaggacttaagtat
tttccagtgaatttttttgaaggtttggaatccattgtgcagctccatgcaggcaattta
cccatctcttctttagagccagagacattcacctttactcctactcttcaagagcttgat
ttgagcaacaataactttatttcactaagcaatactttattccaccccatatcaaagctg
acagaactgcacctgaatagaaataagctgaattctctcaatttttttctcaatgccaac
ctttcaagactgactctcttcagagcaactggaaatgttatagacgttatcacagacgag
caattaagctctttaccttcccttcttttcctagatctcaggcaaaacaatttcatctgt
aaatgtatcaaccaaatgtttattcagtggtccctgcagaatcctaaaactcaggtgctc
catttctataagtacacttgcgctttccctccagcatataaaggaaatctgctatggact
tttaacacatcttcttgctttattgattatgaatttatcctgtttattgcaaacgcaaca
gcagttttttcacttatgcttgcctgtttcttttatcaatggaaattgcacatggtctac
atgtttcacctgttgcttgcttattatattgacaagaaacaaaaaaggaaggggcaaggt
acgggatacgattatgatgccttcctttcctacaacacccatgatgagaaatgggtagag
gatgacctacttccagtgctggaaaaccaatatggctggaaagtttgtttgcatcaccgg
gacttcgagccaggacggtccatccttgaaaacattgtagataatatctacgcaagcagg
aagacaatttgtataataagtcgtcactatctggagagtgagtggtgctccaaggagata
caagtagcaagctttcgcatctttgatgaccataaggatgtcctggttcttatcttcctg
gaagacattcctacagaatacctttccccctatcacagaatgaggaaattgctaaagaca
aaaacttacctcaaatggccggaagatgagcaggaaattccattgttttggcacaagctc
aatatggctatgaaaacaggagatggaaaagaggatgaaaatcctgttttggctggattt
gttcccgatgaaattccataa
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