Thamnophis sirtalis (common garter snake): 106540634
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Entry
106540634 CDS
T06107
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsr04515
]
106540634 (DSCAML1)
Cell adhesion molecules [BR:
tsr04515
]
Immunoglobulin superfamily
Other
106540634 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
fn3_2
Motif
Other DBs
NCBI-GeneID:
106540634
NCBI-ProteinID:
XP_013911293
UniProt:
A0A6I9XK73
LinkDB
All DBs
Position
Unknown
AA seq
2124 aa
AA seq
DB search
MWLVTSCLLLLNSWTSPAHTEDVGTSLYFVNDSIQQVTFSSSVGVVIPCPAAGSPSATLR
WYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNVYFCTAENSVGKIRSPNIR
VKAVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVNVVSWEKDTVSIISENRFFITF
YGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTILDSFQDQEAK
VGQLVELPCIASGYPNPAIRWVKDGRPLPADSRWTKRITGLMISDLRVEDSGTYICEITN
TFGSAEVTGILAVIEPLRVTLTPKKLKTGIGSTVILSGALSGSPEYSIRWFRNTELVVPD
DFVAIRGIHNETLLITAAQKSHSGAYQCFATRKVQTAQDFAVIVLEDGTPRIVSSFSEKV
VNPGEPFSLMCAAKGAPPPTITWSLDDEPIQRDGSHRTNQYTMSDGTTVSHMNVTGPHIR
DGGVYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKW
YKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPL
IQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIVSGSGITIESKEFMSSLQISS
VSLKHNGNYTCIASNAAATISRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPP
PKVMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDIS
KSMFLTVKIPAMITSHPNTTIAIKGQAKELNCTARGERPIIIRWEKGDTVIDPDRNVRYA
IATKDNSDEVISTLKLKPAERGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREV
KARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPSINQANIVDLHPASVY
SIRMFSFNKIGRSEPSKDLTISTEEAAPDGPPLDVTLQPMTSQSIQVTWKAPKKELQNGV
IRGYQIGYRENSPGSSGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
SEINATTLEDGMSMSMSMAWCSAAVAFYFSPDRLSCKMVPLYPKLLLSFQRLFLFLFSTR
KRMYVKAEITVRRSMCAPQLGFIVRQAFWGFRCLQKGGNFSMGGKINGSHHSVVVTIRTS
VCFHGGELSSRKTKPKFLPQWGEMQNVTTTRERAELRGMEKFTNYSVQVLAYTQAGDGVR
SNVLHIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPSKPNGVIRKYTIFCSSPGSGQPAP
SEYETSPEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNMSEKVTIEPAGKAPAKIISFGGT
VTTPWMKDVRLPCSSVGDPLPAVKWTKDSDDSAIPVILDGHRQIQSNGTLILRSVKAEDS
GYYTCTATNTWGFDTIIVNLLVQVPPDQPRLMVSKTSASSITLAWIPGDNGGSSIRGFVL
QYSVDNSEEWKDVLIASAERSFKLGSLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGRE
PSFNKDQHLFTHINSTHARLSLQGWNNGGCPIVAIVLEFRPKSTWVWQSLRANYSSEVFL
TDLHEATWYELRMKACNSAGCGNETLQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACP
VILATLGVALLFVVRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHID
IPRVQLLIEDKEGIKQIGDDKATVPVSDPEFNQTVNPQTFCTGVSLHHPALIQNTGPLID
MSDIRPGTNPVSRKSVKSTHSARNRYSSQWTLTKCQASTPARTLASDWRAVGSQHGITVT
ESDSFSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFISD
SSSDQMTTGTNENADSMTSMSTPSEPGICRFTASPPKPQDSDRGKGVAVPIPHRANKSDY
CNLPLYMKSETFFRKPDLQDPCPVVPPREASIRNLARAYHTQARHLTLDASSKASAAPHA
TAATTLPQRTLAMPGSASGAPPAASTAAPAPAPEPSPGPVAEPRLPTHSKIGGSKDSLLE
MSTSGVGRPQKQGTGAYSKSYTLV
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtcacttcttgcctcctgctgctcaactcctggaccagcccagcgcacact
gaagatgtgggtaccagcctctattttgtgaacgactccatccagcaggtgaccttctcc
agctctgtgggagtggtcatcccgtgcccagcagcaggatcacccagtgccacccttcgc
tggtaccttgcaactggggatgacatctacgatgtcccacacatccgccacgtccatgcc
aacgggacgcttcaactttaccccttttcgccatctgccttcaacagcttcatccacgac
aatgtttacttctgcactgcggagaactccgtgggcaaaatcaggagcccaaacatccgg
gtcaaagcagtgttcagggaaccttacacagttcgagtggaggatcagagatcaatgcgt
ggaaacgtggctgtatttaagtgcctcattccttcttcagtgcaagaatatgtcaatgtt
gtatcctgggagaaagacacggtttctatcatctctgaaaataggtttttcattactttc
tatggtgggttgtacatatcagacgtccagaaggaagacgccctctccacctacagatgc
attacaaaacacaagtacagtggggagacgcggcagagcaatggtgcccgcttgtctgtc
tcagacccagcagagtccatcccaaccatcctagacagcttccaggaccaagaagccaag
gtggggcaactagtggaactgccatgcattgcctctgggtacccgaatcctgccatccga
tgggtaaaggatggaaggcccctgcctgctgacagtcgatggaccaagcgtatcacaggc
ctgatgatcagtgatttgcgtgtggaagacagtgggacctacatctgtgaaatcacaaac
acttttgggtctgctgaggtcactgggatcctggcagtaattgagccactgcgggtcaca
ctcacaccaaagaagctgaagactggcattggaagcactgtcatcctctctggtgcactt
tctggctcgccggaatactccatccgttggttccgcaatacagagctggtggttccagat
gactttgtcgccatccggggaatccacaatgagacgctgctcatcacagctgcccaaaag
agccactcaggggcctaccagtgttttgccaccaggaaggtccagacagcccaggacttt
gccgtaattgtcttggaggacgggaccccccggattgtctcctccttcagtgagaaggtg
gtgaaccctggggagccgttctccctgatgtgtgcagccaagggagcccctccccccacc
atcacctggtccttggatgatgagcccatccagagagacggcagccaccgcaccaaccag
tacaccatgtccgacggcaccaccgtgagccacatgaatgtgacgggcccacacatcagg
gacggaggagtctaccgatgtactgcgcggaactcggtgggcagcgccgaataccaagcg
cgaataaacgtaagaggccctcccagcatccgtgccatgaagaacatcacggctgtggca
ggccgggacaccttcatcaactgccgggtgattggctacccgtattactcaatcaagtgg
tacaaggactcattactcctgccggacaaccaccgacaagtggtctttgaaaatggcacc
ctcaaactgatggatgtccagaaggggatggacgaaggagaatacctttgcagcgtcctc
attcagccgcagctctcgatcagccagagcgtccatgtcactgtgaaagttcctcctctg
atccagccctttgagtttcctccggcctccatcgggcagctgctgtacattccgtgcgtg
gtctcttcgggcgatatgccgatccgcatcacttggaggaaggacgggcaggtgattgtc
tcaggctccggcatcaccatcgagagcaaggagttcatgagctccttgcagatctccagc
gtctccctgaagcacaacggcaactacacctgcattgccagcaatgccgctgccaccatt
agccgagagcgtcagttgattgtacgagtgcctcctcgttttgtggtccagcccaacaat
caggatgggatctatggcaaagctggggtcttgaactgttcggtggatggctatccccct
cccaaagtcatgtggaaacacgctaaaggcagtgggaacccccagcagtaccaccctgtc
cccctgacgggccgcatccagatcctgccaaacagttcactgctcatccggcatgtttta
gaagaggacatcggctattacctgtgccaggccagcaacggggttggcacagacatcagc
aagtccatgttcctcaccgtgaagatcccagctatgatcacctcccaccccaacaccacc
atcgccatcaagggccaggctaaagagctgaattgcacagctcgtggtgagcgccccatt
atcattcgttgggagaaaggggacaccgtgattgatcctgaccgaaacgtccgatacgcc
atcgctacgaaggataatagcgacgaggtcatctcgaccctcaaactcaagcctgctgaa
cgaggagactctgtttttttttcctgccatgcgatcaactcctatggggaagaccgagga
ctcattcaacttactgtacaagagccaccggaccctccagaactggagatccgagaagtg
aaagcccggagtatgaacttacggtggactcagaggtttgatggcaacagcatcatcaca
ggcttcgacattgagtacaagaataagtctgattcctgggacttcaagcaatccacccgg
aacatctccccctccattaaccaggccaatatcgttgaccttcacccagcctctgtatac
agcatccgcatgttttcattcaacaagattggccgcagtgagccgagcaaggatctgacc
atcagcacggaggaagcagctcctgatggtcccccactggatgtcaccttgcagccaatg
acatcccaaagcatccaggtcacctggaaggccccaaagaaagaactccagaacggggtt
atccgaggctaccagatcggctatcgggagaacagcccaggaagcagcgggcaatacagc
attgtggagatgaaggccacaggggacagtgaagtctacacccttgacaacctgaagaaa
tttgcccagtatggtgtggtggtgcaggccttcaaccgggcaggcaccggcccatcgtca
agtgaaatcaatgctaccacgctggaggatggtatgtcaatgtcaatgtcaatggcttgg
tgttcagcagctgttgcattttatttcagcccagataggctttcctgcaagatggtgccc
ctctacccaaagctgctactatctttccaaaggctgtttctgtttctgttttccacacgt
aagcggatgtatgtgaaggcagagatcacggttaggagaagcatgtgcgctccccagttg
ggttttattgtgcgccaggcattttggggtttcaggtgcctgcaaaaaggtggcaatttc
tctatgggaggtaaaataaatggtagtcaccattctgtggtggtcaccattaggacaagc
gtgtgtttccatgggggagagctcagctctcggaaaacaaaaccaaagtttcttcctcaa
tggggggagatgcagaatgtcaccaccactcgggagcgagcagagctgcggggcatggag
aagttcaccaactacagcgtgcaagtcctggcctatacccaggcaggtgacggagtccgc
agcaacgtcctccacatccagaccaaggaagacattcctggtcctcctgccgggatcaaa
gcggtgccttcctctgccagcagtgttgtggtgtcttggctgccaccctcaaaacctaat
ggagttatccggaagtacaccattttctgctccagcccaggctctggccagccggctccc
agtgagtacgaaacaagcccggagcagctgttttaccgcatcgcacacctgaaccgcggg
caacagtacctgctctgggttgctgctgtcacatccgcagggcggggcaacatgagcgag
aaagtcaccattgagcctgctggaaaagctccagccaagatcatctcatttgggggcacc
gttaccaccccgtggatgaaagatgtgcggctgccatgcagttcagtgggggatcctctc
ccagctgtgaagtggacaaaagacagtgatgattcggctattccggtcattttggatggt
catcgccagatccagtccaacggcaccctgatcctgcgctctgtgaaagcagaggactcg
ggctattacacttgcactgccacaaatacctggggattcgataccatcattgtcaactta
ctggtgcaagtccctccagaccagccccggctgatggtctccaagacttcggcttcatct
atcaccttggcctggatccctggggacaatggcggcagctccatccgaggctttgtgctc
cagtactcagtggataatagtgaggagtggaaggacgtgttaattgcttccgcagagcgc
tccttcaagctgggcagcctgaaatgcgggacctggtacaaggtgaagctggcagccaag
aacagcgttggagctggtcgtatcagtgagatcattgaggccaagacgcatggcagagaa
ccatctttcaataaggaccaacatctcttcacccacatcaactccacccatgccagactg
agtctgcaaggctggaataacgggggctgccccattgtcgcaattgtcctggagttccga
cccaaaagcacctgggtctggcagagtctgcgggctaattattccagtgaagtctttctg
acagacctgcatgaagccacttggtatgagctgcgcatgaaagcatgcaacagtgctggc
tgcggcaatgagaccctgcagttcgccaccctggactacgatggcagcaccattccgcct
attaagtctgcgcaaggggaaggagacgatgtcaagaagctcttcaccatcgcttgccct
gtcatcttggccacacttggcgttgccctgctctttgttgttcgaaagaagcggaaggaa
aagcggctgaagcgtttgcgagatgccaagagtttggctgaaatgctcatcagtaagaat
aatcgtagctttgacacgcccgtgaagggtccaccgcaaggccctcggctgcacatcgac
atcccccgggttcagctgctcattgaggacaaggaagggatcaagcagatcggagatgac
aaagcaacagtccccgtctctgacccagaattcaaccagacggtcaatccacagaccttc
tgcacaggggtatcactacaccacccagccctgatccagaacacggggcctttgattgac
atgtctgacatccgccctggcacaaatcctgtttcaagaaaaagtgtgaaatccacacac
agtgcccggaacagatactccagccagtggactctcaccaagtgccaggcctccacgcca
gcacggactctggcctctgactggagagcagttggctcccagcatggcatcacagtgacg
gagagcgacagtttcagtgctagtttgtcccaggacacagacaaaggccgaaacagcatg
gtgtccacagagagtgcctcgtccacttacgaagaattggctcgggcatatgagcatgcc
aagttagaggagcagctgcagcatgccaagtttgaaatcacagagtgcttcatttctgac
agctcctccgaccagatgaccactggcaccaatgagaatgctgacagcatgacttccatg
agcactccctccgagccaggcatctgccgtttcacagcctctcctcccaaaccacaggac
agtgaccgtggcaagggtgtagctgtgcctatccctcaccgagcaaataaaagtgactac
tgcaacctgcctttgtatatgaaatccgaaacgttcttccgcaagccagaccttcaagac
ccttgtcctgtagtgccaccccgggaagcctccatacgaaatctggctcgggcttaccac
acacaagccagacacttgactttagatgccagcagcaaagcctcggctgcgccacacgca
actgcagccaccaccttacctcagagaactcttgccatgccaggctcggccagtggtgcc
cctcctgctgcttccaccgctgctcctgccccggcccctgaacctagcccgggtcctgtt
gctgagccacgcttgcctacgcatagcaagattggagggtcgaaagactccctattagaa
atgagcacatctggtgtagggaggccacagaagcagggaaccggtgcctactccaaatcc
tatacactggtgtag
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integrated database retrieval system
