Thamnophis sirtalis (common garter snake): 106540647
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Entry
106540647 CDS
T06107
Symbol
NTN1
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106540647 (NTN1)
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Axon guidance molecules
106540647 (NTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
106540647
NCBI-ProteinID:
XP_013911313
UniProt:
A0A6I9XK92
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSPAGWEALVALAAVACLAEGVRGGYGLNMFAVQTAPQPDPCYDENGQPRRCIPDFVNAA
FGKEVKVSSTCGRPQSRYCVLAEKGEERSRSCHLCDAADPKRAHPASYLTDLNNPHNLTC
WQSESFVQHPLNVTLVLALGKKFEVTYVSLQFCSPRPESMAIAKSMDGGKSWVPFQFYST
QCRKMYNKPSRAAITKQNEQEAICTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQ
DWVTATDIRVVFSRLHTFGDENEDDSELARDSYYYAVSDLQVGGRCKCNGHASRCVRDRD
DHLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVACNCNLHARRCRFNMELYKL
SGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKPITHRKACKACDCHPVGAAGKTCNQT
TGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVVPPTTVASSTEKPADCDTYCKAS
KGKLKINMKKYCKKDYAVQIHILKAEKAAEWWKFTVNIISVYKQGANRIRRGDQILWIRS
KDIACKCPKVKSMKKYLLLGHDENSPDQNGLVADKSSLVIQWRDTWARRLRKFQQREKKG
KCKKA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccccggcgggctgggaggccctggtggccctggcggcggtggcctgcctggccgaa
ggggtgcgcggcggctacggcttgaacatgttcgccgtgcagacggccccgcagccggat
ccctgctacgacgagaacgggcagccgcggcgctgcatcccggacttcgtcaacgccgcc
ttcggcaaggaggtgaaggtgtcgagcacctgcggccgcccccagtcgcgctactgcgtg
ctggccgagaagggcgaggagcggagccgcagctgccacctgtgcgacgccgccgacccc
aagcgggcccaccccgcctcctacctgaccgacctcaacaacccgcacaacctgacctgc
tggcagtcggagagcttcgtgcagcacccgctcaacgtgacgctggtgctggcgctgggc
aaaaagttcgaggtgacctacgtcagcctgcagttctgctcaccgcggccggagtccatg
gccatcgccaagtccatggacggcggcaagagctgggtgcccttccagttctactccacg
cagtgccgcaagatgtacaacaagcccagccgcgccgccatcaccaagcagaacgagcag
gaggccatctgcaccgactcgcacaccgacatgcggcccctgagcggcgggctcatcgcc
ttcagcaccctcgacggccggccctcggcccacgacttcgacaactcgcccgtcttgcag
gactgggtgacggccaccgacatccgggtggtcttcagccgcctccacaccttcggcgac
gagaacgaggacgactccgagctggcccgcgattcctactactacgccgtctccgacctg
caggtgggcggccgctgcaagtgcaacgggcacgcctcccgctgcgtccgggaccgtgat
gaccacctggtctgcgactgcaagcacaacaccgccgggcccgagtgcgaccgctgcaag
cctttccactacgaccggccctggcagagggccaccgcccgagaagccaacgagtgcgtc
gcttgtaactgcaacctgcatgccagaaggtgtcgttttaacatggaactctacaaatta
tccggtcgcaagagtgggggtgtttgccttaattgccgacacaacacagctggtcgtcac
tgccactattgtaaagaaggctactatcgggatatgaccaaacctatcacgcacaggaaa
gcatgcaaagcatgcgattgccatcccgtgggtgcagctggaaaaacctgtaatcaaact
acagggcaatgtccctgcaaagatggtgtgacgggcatcacttgtaatcgatgtgccaaa
ggctaccagcaaagcagatctcccattgccccctgcataaagattcctgttgttcctcct
accactgtggccagcagcacagaaaagcctgcagactgtgatacctactgcaaggcatcc
aaagggaagctgaagataaacatgaagaagtattgcaagaaagactatgctgtccagatc
cacatcctgaaagcagagaaagctgcagaatggtggaagttcacagtcaacatcatctct
gtttacaagcaaggggcgaatcgaatacggcgtggtgaccagatcctctggatacgctcc
aaggacattgcctgcaagtgtcccaaggtcaagtctatgaagaaatatttgttactgggc
catgatgagaactctccagatcagaatggtcttgtagcagacaaaagcagccttgtgata
caatggagggacacatgggccaggcgcctgagaaagttccagcaacgagaaaagaagggg
aaatgcaagaaagcctag
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