Thamnophis sirtalis (common garter snake): 106540690
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Entry
106540690 CDS
T06107
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106540690 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106540690 (DCP1B)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106540690 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
106540690 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
106540690
NCBI-ProteinID:
XP_013911370
UniProt:
A0A6I9Y383
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MKNLTQQEQLKAQQGSGLGISPVSLSSGDRKDMDILQMLTRAKDEYTKCKTCSEPKQMIS
SALYHNPNLIKPIPLKPRESQKAQHTDSEPRHLSLMTLFGKQEKTNLYQNVSETSQKLHQ
DNFPPRQGVLRSFLYEEPVRHSPTTEKQLCPAIQKLMVRGPELQPVSELPENRLCENGSH
PSVGEAFTGLFQPVTSQSIGSSHPAQNTAWPGSLLQQLQGQSEQMTKVEANSIGLANSAT
PAFNRTPAISLAAQVNRAIQPPTMYFNGSLPGQALGKEQSKPPKRSHPLPGNHSGNSGII
SPQELLKKLQIVQQEQQLHIASRPTLAAKFPVVTQASATLKPLDSWMDKASATEKQPSLL
QVISPQRIPATVAPSLLMSPMVFRQTAPQLPKPSESGWLNQESTSGSSNLLLSLQNSEAT
IPKSSPLTKLQLQETLLHLIQNDDNFLNVIYDAYLGSVGKAALKKPI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttaactcagcaagaacaactgaaagcgcagcagggatctggcctagggatt
tcaccagtcagcctcagctctggtgacaggaaagacatggatatcttgcagatgctcacc
agagccaaagatgaatacacaaagtgtaaaacatgctcggagccaaaacaaatgatcagt
tctgctctataccacaatcccaacttgatcaaaccaatccctctaaagcccagggaaagt
cagaaagcacagcacacagattctgagcctcggcacctgtcccttatgactctctttgga
aagcaggaaaaaacaaatctgtaccaaaatgtctccgagacatctcagaaactccaccaa
gacaattttccgccaaggcagggagtcctacgctctttcttgtatgaggaacccgtaaga
cactcgcccaccacagaaaagcagctctgcccggccattcaaaaactgatggtgcgtggg
ccagagcttcaaccggtctctgaactcccagagaaccgcctctgcgagaatggcagccac
ccttccgtgggggaagctttcactgggctcttccagcctgtgacttcacagagcatcggg
agttctcatcccgcccagaataccgcttggccagggagcctgctccagcagttgcaaggc
cagtccgaacagatgactaaagtggaagctaacagcataggactagcaaattcagctacc
ccagccttcaacaggactccagccatctccttggcggcccaggtaaaccgcgcaatacag
ccacccacgatgtacttcaatggttccctgccaggccaagcgcttggtaaagaacaatcc
aagcctcctaagcggtcacatcctcttcctgggaaccactctggaaattctggcataatt
tcacctcaggagttgttgaagaaactgcagatagtgcagcaggaacaacagctgcacata
gccagtcggccaaccttagcggctaagtttcctgttgttactcaggcctccgccactctg
aaacctttggattcttggatggacaaggcttcagctacagagaagcagccctctcttctt
caggtcatctccccgcagcggattcccgctactgtagctccatccctgctgatgtctcca
atggtatttcgtcagactgccccacagctgccaaaaccaagtgaaagtggatggctgaat
caagaaagcacttctggatcatcaaaccttcttctgtctcttcagaactcagaagcaacc
atcccaaagagcagcccactaaccaagttacagctacaggaaacacttctgcatctgatt
cagaatgacgacaacttcctaaacgtcatctacgatgcttatctcggcagcgtgggaaaa
gcggcattgaaaaagcccatctga
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integrated database retrieval system
