Thamnophis sirtalis (common garter snake): 106540739
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Entry
106540739 CDS
T06107
Symbol
APC
Name
(RefSeq) adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04310
Wnt signaling pathway
tsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106540739 (APC)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
106540739 (APC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106540739 (APC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106540739 (APC)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsr04812
]
106540739 (APC)
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106540739 (APC)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
106540739 (APC)
Cytoskeleton proteins [BR:
tsr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
106540739 (APC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_rep
APC_u14
APC_u9
Arm
SAMP
APC_N_CC
APC_u15
APC_15aa
APC_u13
Suppressor_APC
ARM_ARMC5
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
106540739
NCBI-ProteinID:
XP_013911450
UniProt:
A0A6I9Y3C2
LinkDB
All DBs
Position
Unknown
AA seq
2828 aa
AA seq
DB search
MAAVSYDQLLKQVEVLKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSIEDEAM
ASSGQIDLLERLKELNLDSNNFPGVKLRPKISMRSYGSREGSVSSRSGECSPVPMGSFPR
RGFMNGSRESTGYLEELEKERSLLLAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENFSL
QTDMNRRQLEYEARQIRAAMEEQLGTCQDMEKRAQVRVARIQQIEKDILRIRQLLQSQVA
EPERTAPSKHGASSHESERQNECQGAAEIVATAGSSQSSTARMDHETSSVMSSNSNYSVP
RRLTSHLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLH
GNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCW
EWQEAHDQGMDQDKNPMPAPVDHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQV
DCEMYGLTNDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQ
QVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTE
NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNC
LQTLLHHLKSHSLTIVSNACGTLWNLSARNAKDQEALWDLGAVSMLKNLIHSKHKMIAMG
SAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQQLSETFDNIDNLSP
KTSHRNKQRHKQNLYSEYVLDGNRHEDGVCRSENFNSGNVTVLSPYLNTTVLPGSSSSSR
GNTENSRSEKERSLDRDRAVGLNSYHNTAENSGNSSKRIGIQISTAATQISKAMEETANM
HISQDERSSGSITEIHSLSEDRNALRRTSTAHSHTSSYNFPKSENRACSVPYSKVEYKRA
SNDSLNSVSSSDGYGKRGQMKPIESYSEDEESKFCSYGQYPADLAHKIHSANHMDDNDGE
LDTPINYSLKYSDEQLNSGRQSPSQNERWARPKHEIEEEIKQNEQRQNRSQSGAYPVYPE
SGDNKHLSYQSAFGQPECVSPFRSRESSNSEQNKVGCNHGINPKVNQSLCQVDDYETDKP
TNYSEHYSEEEQHEEEDHPTNYSIKYNEEAHHVDQPIDYSLRYSTEVPPAQKPSFSFSKT
PSVQSTKTDHISSSSGNTSSSAASKKHNQLHPNSAQNRANHTQKPTSCKASSINQETIQT
YCVEDTPICFSRCSSLSSLSSAEDETGRDHSTRVADTDNFLKIVGMKENSGNQSTAVTTN
ETSLASQHLRTKSNRLQTSTVSSSDSARHKAVEFSSGAKSPSKSGAQTPKSPPEHYLQET
PLMFSRCTSVSSLDSFESRSIASSVQSEPCSGMISGIISPSDLPDSPGQTMPPSRSKTPP
PTQVPQVKREAAKAKVSNTEKRESGPKQTAVNTAVQRVQVMQDADTLLHFATESTPDGFS
CSSSLSALSLDEPFIQKDVELRIMPPVHENDHVNEAELEQSNDTKDNIEKDTKESTEIEK
DILDDSDEDDIEILEECIISAMPTKSSRKAKKPSQVTASKIPPPVARKPSHLPVYKLLPS
QSRLHSQKHVTFTPGDDMPRVYCVEGTPINFSTATSLSDLTIESPPNELASTGIAVSGIE
SAEIEKRDTIPTEGRNTEDAQRGKSSSAVGLNDDKTEEGDDILAECINSAMPKGKSHKPF
RVKKIMDQIQLVSTPSSNTKNQLEIEKKKPTSPVKPMPQSNEYRARLRKNVESKNNFSSE
RNNENKETKKQTLENNSKDFNDKLPNNEERTRGNFTFDSPHHYTPIEGTPYCFSRNDSLS
SLEFDDDVDLSKEKAELRKGKNNEIEANSNTEYSSNQQSVTIPQAGQKHSSTGRNHPKPL
GQNQTSFCPSAKDITSTDEKTQNFAIENTPVCFSRNSSLSSLSDIDQENNNSKESEPVEQ
IEPPEKHIEPTRAPVSGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPK
KKKPSRSKGDNEKFSSRNTGGILAENLTLDLKDIQRPDSENGFSPDSENFDWKAIQEGAN
SIVSCLHQAAAAASLSRQASSDSDSILSLKSGISLGSPFHLTPDQEEKPFTCNKGPRIIK
PGDKSTLENKKNECESKGIKGGKKVYKSMITGKARSNSELTSHLKQPLQTNMPSISRGRT
MIHIPGVRNSSSSTSPVSKKGPQLKNAASKSPNESQSSTSSPRVVKPSMKSDPSPISRQP
SQQVISSKGPSRSGSRDSTPSRPQQQPLSRPLQSPGRNSISPGRNGISPPNKLSQLPRTA
SPSTASNKSSGSGRMAYTSPGRQMNQQTVAKQTGLPKSTSGIPRSESASKGLNQNCNISG
SNKKTELSRMSSTKSSGSESDRSERPVLVRQSTFIKETPSPTLRRKLEESVSFESLSPSR
PDSPTQSQTQTPVLSPSLPDMSLSAHSAIQASGWRKLPPNLSPSLEYSDGRPTKRHDITR
SHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSESSEKAKSEDEK
QHVTSFSGLKQGKENQAPTKGTWRKIKENEIPQIMTSPPQNMSPSPTNGADSKTLIYQMA
PAVSKTEDVWVRIEDCPINNPRSGKSPTGNSPPIIDSGSEKSSINNKDSKDLHGNVPIRT
MGLETRLNSFTQSDGPDKKGTETKIVLSSSTAAPETSENTLTERTPFSSSSSSKHSSPSG
AVAARVTPFNYNPSPRKSSIDNSSVRPSQIPTPATNSTKKRDSKTESTDSNGAQSPKRHS
GSYLVTSV
NT seq
8487 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtgtcatatgatcagttgttaaaacaagtagaggtgttaaaaatggagaac
tcaaatcttcgacaagaactggaagataattcaaatcatcttacaaaacttgaaactgaa
gcatctaatatgaaggaggtattgaagcaattgcaaggaagtattgaagatgaagcaatg
gcttcatctggtcagattgatttgctggaacgtcttaaagaactgaatttggatagcaat
aacttccctggagtgaagctaaggccaaagatatccatgcgttcatacggaagcagagaa
ggatcagtttccagtcgatcaggtgaatgcagccctgttcccatgggatcatttcccaga
agaggttttatgaatggaagtagagaaagcactggttatctagaagaactagagaaagaa
aggtctcttttgcttgctgagcttgaaaaggaagaaaaagaaaaagactggtattatgct
cagcttcagaatttgactaaaaggatagatagtcttcctcttactgaaaatttttcattg
cagactgacatgaatagaaggcaattggaatatgaggcaagacagatcagagctgccatg
gaagaacaacttggtacatgtcaggacatggagaagagagcacaggtgcgagtagctaga
attcaacaaattgagaaagatattctgcgtataagacagctattgcaatcccaggttgct
gagccagagagaacagctccaagcaagcatggtgcaagttcgcatgaatctgaaaggcaa
aatgaatgtcaaggagcagctgaaattgtggcaactgctggcagtagccagagttcaact
gctcggatggaccatgaaacatccagtgttatgagttctaatagtaattactctgttcct
cgaagactgacaagtcacttgggtaccaaggttgaaatggtgtattcactgctgtcaatg
ttgggcactcatgataaagatgatatgtcacgaacattgctagccatgtctagctcccag
gatagctgcatagctatgcgccagtctggatgtcttcctcttctcattcaacttttgcat
ggcaatgataaagactctgtgttgttgggcaactctcgtggaagtaaagaagctcgtgcc
agagccagtgcagcactacataatatcattcattcccagcctgatgataaacgaggcaga
cgagaaatacgtgttctccatcttctagaacaaatccgagcttactgtgaaacttgttgg
gaatggcaggaagcacatgatcagggcatggaccaagataaaaatccaatgccagctcca
gttgaccatcagatctgtcctgcggtatgtgttttaatgaagctttcatttgatgaagag
cataggcatgcaatgaatgaacttgggggtttacaagccattgcagaattgctacaggta
gattgtgaaatgtatgggcttactaatgaccattatagtgtcacattaagacgatacgct
ggaatggctctaacaaatttaacttttggagatgtagccaacaaggctactttgtgttct
atgaagggatgcatgagagctttagtagcccagttaaaatctgaaagtgaagatttgcag
caggttattgcaagtgttttaagaaatttgtcttggcgggcagatgtgaatagtaagaag
acactacgagaggttgggagtgtgaaagcactgatggaatgtgctttggaagttaaaaag
gaatctacgctgaaaagtgtattgagtgccttatggaatctatcagcgcattgcactgag
aataaagctgatatatgtgcagtggatggtgctcttgcctttttggttggcacactgaca
taccgaagccaaacaaatactttagccatcattgaaagtggagggggaattcttcgtaat
gtgtctagtttgattgctacaaatgaggaccataggcaaatactgagagagaataactgc
ttgcaaaccctcttacatcatttgaagtctcacagtttgacaatagtcagtaatgcatgt
ggaactttgtggaacctgtctgcacggaatgcaaaggaccaggaagcgttatgggacttg
ggagcagtcagtatgctcaaaaatctcatacattcgaagcacaaaatgatagccatgggg
agtgctgcagctctaagaaatttaatggcaaacagacctgcaaaatacaaagatgctaat
attatgtctccaggttcaagcttgccatctcttcatgtcagaaagcaaaaagcactggaa
gcagaattagatgctcaacaattatctgagacttttgacaacattgataatttaagtccc
aaaacatctcaccgcaataaacaaagacataaacagaatctttacagtgagtatgttttg
gatggtaatcgccatgaagatggagtgtgcagatcagaaaactttaacagtggaaatgtg
actgtactttcaccatatttaaatactacagtattgcctggctcctcctcatcaagcaga
ggaaatacagagaattctcgttctgaaaaagaacggagtttagatagggaccgtgcagtg
ggattgaacagctaccataacacagcagaaaattctggcaactcttctaaacgaatagga
atacaaatttctactgctgctacccagatttcaaaagcaatggaggaaacagcaaatatg
cacatatcacaagatgaaagaagcagtggatctataacagaaattcatagtttgtcggaa
gacagaaatgctttaagaagaacttctactgctcactcacacacaagtagttataacttt
ccaaaatctgagaacagggcatgttctgtaccatattcaaaagtagagtataaaagagct
tctaatgatagtttaaacagtgtcagtagcagtgatgggtatggtaaaagaggacaaatg
aagcctatagaatcttattctgaagacgaagaaagtaaattttgcagttatggacagtat
cctgctgatttagctcataaaatacacagtgctaatcacatggacgataatgatggggaa
ctggatactccaataaactatagtttgaaatattctgatgaacaattgaattctggaagg
cagagcccatctcagaatgaaagatgggcaagacctaagcatgaaatagaagaagaaata
aaacagaatgagcaaaggcagaacagaagtcaaagtggagcatatcctgtatatcctgag
agtggtgataataaacacctaagttatcaatcagcttttggacagccagaatgtgtctct
cctttcagatcaagagaatccagtaattcagaacaaaacaaagtaggatgtaatcatgga
ataaatcccaaagtcaatcagtccttgtgtcaggtggatgattatgagactgataagcct
acaaattatagtgagcattattctgaagaggaacagcatgaggaagaagatcatccaact
aattacagcataaaatacaatgaagaggcgcaccatgtggatcagccaattgattacagt
cttcgatattcaacagaggttcctcctgcacagaaaccatctttttcattttcaaaaact
ccatcggtacagagtactaaaacagatcatatttcgtcaagcagtggaaatacatcatca
tctgctgcatccaaaaaacataaccaacttcatccaaattctgctcagaatagggcaaat
catactcagaagcctacatcctgcaaagcatcctccattaaccaggaaacaatacaaact
tactgtgtagaagatacaccaatatgtttttcaagatgtagctctctgtcatctttatca
tcagctgaagatgaaacaggacgtgatcattccacacgggtagctgatactgataacttt
ctgaagatagttggaatgaaagaaaacagtgggaatcagtcaacagcagtaacaactaat
gaaacctcattagcttcccagcatcttagaacaaaatcaaatagacttcagacttccact
gtttcttcctctgattcagcaagacataaagctgttgagttttcttcgggtgccaagtct
ccttcaaaaagtggtgcccaaactcccaagagcccaccagaacattatttacaggagact
ccgctcatgtttagcagatgtacctctgtgagttccttggatagttttgagagccgttca
attgctagctctgttcaaagtgagccatgtagtgggatgataagtggtataataagccca
agtgatcttccagatagtcctgggcagacaatgccacccagcaggagtaaaactccacca
cctacccaagtgccccaagtaaagagagaagcagccaaagcaaaagtatccaacactgaa
aagagagaatctggaccaaaacaaacagctgtaaatacagctgttcaaagggtgcaggta
atgcaagatgctgacactttgttacactttgcaacagaaagtacaccagatggattttct
tgttcatcaagtctgagtgctttaagtcttgatgaaccgtttatacagaaagatgtggaa
ttgagaataatgcctcctgtgcatgaaaatgatcatgtaaatgaagcagaacttgaacaa
tcaaatgatacgaaggataatatagaaaaagatacaaaagaatccactgaaatagagaaa
gatattctagatgattcagatgaagatgatattgaaatattggaggagtgtattatttct
gctatgccaactaagtcttcacgtaaagccaaaaagccttcgcaggtaactgcttctaaa
atacctccacctgtagccagaaagccaagccatttgcctgtatataaacttcttccttct
cagagcagattacattcccaaaagcatgttacatttacccctggtgatgacatgccacgt
gtttattgtgttgagggaacaccaataaatttttcaacagctacatctctgagtgatcta
acaatagaatcacctccaaatgaactggccagtacagggattgctgtttcaggaattgaa
tcagctgaaattgaaaagagggatacaattcccacagaaggaagaaatacggaagatgct
caaaggggaaaaagcagctcagctgttgggttgaatgatgacaaaacagaggaaggtgat
gatattcttgcagaatgtattaattctgctatgccaaaagggaaaagtcacaaacctttc
agagtgaaaaagataatggatcagatccagctagtatctacaccatcctcaaatactaaa
aatcaactagaaatagagaaaaagaaaccaacgtcaccagtaaagcctatgccacaaagc
aatgagtacagagcacgcttaagaaaaaatgtagaatcaaaaaataattttagcagtgaa
agaaataatgagaataaagagacaaagaagcagactcttgaaaataattcaaaagatttt
aatgataaacttccaaataatgaagagcgtacaagaggaaactttacattcgattctccc
caccactacactccaattgaaggaaccccatattgtttttctcgaaatgactctttgagt
tccttggaatttgatgatgatgtagatctttcaaaagaaaaggcagaactgagaaagggg
aaaaacaatgaaattgaagccaactccaatacagaatatagttcaaatcagcaatcagtc
actataccacaagctggccaaaagcactcttcaactggaagaaatcaccccaaacctttg
gggcaaaatcagacctctttttgtccatcagccaaagacattacatctacagatgaaaaa
acgcagaattttgcaatagaaaatacacctgtttgtttctctcgtaattcctctctcagt
tctctcagtgatattgatcaggaaaacaacaatagcaaagaaagtgaacctgtagaacaa
atagaaccacctgagaaacacatagagccaactagagcaccagtttctggatatgctcct
aaatcatttcatgtggaagatacacctgtatgcttttcaaggaacagctcccttagttct
cttagtattgattcagaagatgatcttttgcaggaatgtattagttcagccatgcctaaa
aagaaaaagccatcaaggtcaaagggggataatgaaaaatttagttctagaaacactgga
ggcattttagcagaaaatctcacattagatttgaaagatatacaaaggcctgattcagag
aacggtttctcacccgattcagagaactttgattggaaagctattcaagaaggtgcaaat
tctatagttagctgtttacatcaagctgctgcagcagcatcactatctagacaagcttcc
tcagattcagattcaatcctttcattaaaatcaggaatttccttaggatcaccatttcat
cttacaccagatcaagaagaaaaaccttttacttgtaataagggtccaagaattattaaa
ccaggagataagagtacactggaaaataagaaaaatgagtgtgaaagtaaaggaattaaa
ggaggaaagaaagtttataaaagcatgattacaggtaaagctcgttctaattctgaactt
acaagtcatttaaaacagcccttgcaaacaaatatgccctctatttcccgaggaagaaca
atgattcatattcctggagttcgaaatagttcttcaagtacaagtccagtttctaaaaaa
ggaccacaacttaagaatgcagcatccaaaagtcctaatgaaagccaaagttctactagc
tctccaagagttgtcaaaccgtctatgaaatctgacccaagccctatatctagacagcca
tctcaacaggttatttcaagtaaaggaccttctagatcaggatctagagattctacacct
tctagaccacaacagcaaccattaagtaggccactgcagtctcctggcagaaactcaatt
tcaccaggtagaaatggcataagtcctcccaataagctttcccagctgccaagaacagca
tcgccaagtacagcttccaataagtcatcaggttcaggaagaatggcatacacatcacca
ggcagacaaatgaaccagcaaactgtagcaaaacaaacaggattgcctaaaagtaccagt
ggaattcctagaagtgaatctgcctcaaaaggattaaatcaaaattgtaatatcagtgga
tcaaataaaaagactgagttatctagaatgtcatcaaccaaatcaagtgggagtgaatct
gaccgatcagagagacctgttttagtacgtcagtcaacttttattaaagaaaccccaagt
cctactttaagaaggaaattagaagagtctgtctcctttgaatctttgtcaccttctaga
ccagactccccaacccagtcccaaacacagactccagttttaagtccatcgcttcctgac
atgtctttatctgctcactcagccatccaagccagtggctggagaaaattacctcctaac
ctgagtccatctttagaatacagtgatgggaggccaacaaaacggcatgacataactcga
tctcattctgagagtccatccagattgccaattaacagatcaggaacatggaagcgtgaa
cacagtaaacattcttcatcacttcctcgtgtaagtacttggcgaaggacaggaagttct
tcctcaattctttcagcttcttcagaatccagtgaaaaggcaaaaagtgaggatgaaaag
caacatgtaacttctttttctggactcaaacaaggtaaagaaaatcaagcaccaaccaaa
gggacttggagaaaaataaaggaaaatgaaattcctcaaataatgacaagtcctcctcag
aatatgtcacccagtcccaccaatggtgctgattcaaaaactctaatttatcagatggcc
cctgcggtctctaaaacagaggatgtatgggtgaggattgaggactgtcctattaataat
ccaaggtctggaaaatctccaacaggaaatagtccccccattattgacagtggttcagag
aaaagtagcataaataataaagattcaaaagatcttcatggaaatgttcctattcgcacc
atgggtttagaaacgcgattgaattcatttacccaatctgatggtccagacaagaaagga
actgaaactaaaattgttctaagcagctctacagctgccccagagactagtgaaaacact
ctgactgagcgcacaccatttagttctagcagctcaagtaaacacagctcaccaagtggt
gctgttgcagcacgtgtgacgccttttaactataatccaagccccagaaaaagtagtata
gataacagttctgttcgaccatcgcagataccaacaccagcaactaacagtacaaaaaaa
cgagactcaaagactgaaagtacagattcgaatggtgcacaaagccctaaacgccattca
gggtcttatctggtgacttctgtttaa
DBGET
integrated database retrieval system
