Thamnophis sirtalis (common garter snake): 106540747
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Entry
106540747 CDS
T06107
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
106540747
NCBI-ProteinID:
XP_013911462
UniProt:
A0A6I9XC85
LinkDB
All DBs
Position
Unknown
AA seq
954 aa
AA seq
DB search
MEPPEYLDLDEIDFSDDISYSVTSFKTIPELRRKCDSQNEDRTVSTTNWNSGVSTLLGNT
QKPTGIADMYSKFRPVKRVSPLKHQPESSENNESDDQKNQKVDYKKGDDSPSMTQNDDQT
PDNGDSLKTKCVEPGVLLGELEHYDLDMDEILDVPYIKSNQQLATFSKAAPEKRILNVYS
TLNGLSSKSGPVGDTEKAPTGTTQFCVLSPVKGSQLKKAHSIVTDQHKQLVEEHEFPQPL
IKSGSVHEPEAHSKGFLNRTSAEKMEKSVSHCQLRTFHLQSTESKHDKLSSSVNWNSSGN
SEEKNEDVKKTKSILNIVKEGQISLLPHLAADNLDKIHDESGNNLLHVAASRGHAECLQH
LTSLMGEDCLNERNSEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDHPSLIHYAG
CYGQEKILLWLLQFMQEQGISLDEIDQDGNSAVHVAAQHGYLGCIQTLVEYGANVTMQNH
VGEKPSQSAERQGYTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVGLQNQLQELLA
TQRADGKSQSTSSSSPSSPISGKPQWKQSDTDDVTQSKSKLNTHDGIQIHGSAGTHHPTR
PKLKEEESDKILRQLLGKEISENVCMQEKLSLEFQDVQASKNTKKVPLEKKELKLARLKH
LMQRSLSESDTDSNNSEDQKNTPVKRIDKPRPRPIVENTESTENLHLMIKKHALASGRRF
PFGIKTSKSVDGHSPSPTSESSDPDNESHYQTGTVSQSQVGGDPNHANSDTTIAPKIATS
PKSALKSPSSKRRTAQNSKLRVTFEEPVVQLEQTEIGLNGEKDKEQNKSLPRPIPNADTG
DQQKRPFGTFRSIMETLSGNQNNNNNYHSSSLIKTSSPFTSLGRKATDSKGNSATSTKGK
NKPALCSSYISFSTRMQIEDHLDNNAWHNSYNEKPQSFYSKNCFEEPELQELFL
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcctgagtacctagatttggatgaaatagattttagtgatgatatttcttac
tcggtaacttccttcaagaccatcccagaattacggaggaagtgtgattcacagaatgaa
gacagaacagtgtccaccacaaactggaactcgggagtttcaacactccttggaaacaca
caaaaaccaacaggcattgcagacatgtatagcaaattcagaccagtaaagagggtttca
ccacttaagcaccaaccggaaagctctgaaaacaacgagagtgatgaccaaaagaatcaa
aaggtggactacaagaaaggcgatgattctccatccatgactcagaatgatgatcaaact
ccagataacggtgacagtctaaaaactaaatgtgttgaaccaggagttttgctcggcgag
ctggagcactatgatttggacatggatgaaattttggatgtgccttatattaaatcgaac
cagcagcttgccactttttcaaaggcagctcccgagaaaaggattttgaatgtgtattca
acactgaatggtcttagcagcaagtccggccctgtaggggacactgaaaaggccccaaca
ggaacaacgcagttctgtgttctgtcccctgtgaaaggctctcagttgaaaaaagcacac
tccattgtcactgatcagcataagcaattagtggaagaacatgagtttccacagccactc
attaaaagtggttcagtccatgaacctgaagcccacagcaagggcttcctcaataggact
tcggctgaaaaaatggagaagtctgtatcccactgccaattgaggactttccatctgcaa
agtaccgaaagcaagcatgacaaactgagcagcagtgtgaattggaacagttctggaaat
tcagaagaaaagaatgaggatgtgaaaaaaactaagagcatcttaaatattgtgaaagag
ggacaaatttcacttctgccacaccttgcagcagacaatctggacaaaatccacgatgaa
agtggcaacaatcttttacatgttgcagcgtcgagaggacatgctgagtgcttacagcat
cttacttctctgatgggtgaagactgcctgaatgagcgtaacagcgaacagctaactcca
gcgggcttagcaataaagaatggtcagctggagtgtgtgcgatggatggtgagtgaaaca
gaagctattgcagaactgagttgctctaaggatcacccaagccttatccattatgccgga
tgctatgggcaggaaaaaatacttctatggcttcttcagtttatgcaagagcaagggatt
tctttggatgaaattgatcaggatggtaatagtgcagttcatgttgctgctcagcatgga
tacttagggtgtatacagactctggtggaatatggagcaaatgtaactatgcaaaaccat
gttggagaaaaaccttcccaaagtgctgaacggcagggatacaccatgtgttcacgttac
ttggtagtggtggagacatgtatgtcactggcatcccaggttgtgaagttaacaaaacag
ctaaaagagcagacagtagagcgtgtgggtttacagaaccaactccaggagcttctagca
actcagagggcagatggaaaatcacagtcaacatcttcaagttcaccatcatcacccatt
tctggcaaacctcagtggaaacaatctgatacagatgatgtgactcaatcaaaaagtaaa
ctgaacactcatgatgggattcagattcatggaagtgcaggaactcatcaccctactcgg
ccgaagttgaaagaggaggaatctgacaaaatcctgcgccagttgctggggaaagaaatc
tctgagaatgtctgcatgcaggaaaaactgtccttagaatttcaggatgttcaagcttcc
aagaatacaaagaaggtgccgttggagaaaaaggaactgaaattagcaagactgaagcat
ctaatgcagaggtccctcagtgaatctgacacagattcaaataattctgaagaccaaaag
aacacacctgtgaaaagaattgataagcccaggccacggcctatagtggaaaatactgaa
agcactgagaatttgcatctcatgattaagaaacatgctttggcatccggacgccggttt
ccttttggaattaaaacctcaaaatcagtggatggtcacagcccttctcccacttccgaa
agcagtgatcctgataatgaatcccactatcagactggaaccgtgtctcaaagccaggtt
gggggagaccccaatcacgccaattctgataccacgattgctcccaaaatagccacgagt
cccaagagtgccctcaagtctccctcttcaaaacgcaggactgctcagaattcaaaactc
agggtgacatttgaggagcccgtggtacagttagagcaaacagagattggtttaaatgga
gagaaggacaaagagcagaataaatctcttccacggccaatacctaatgctgacactggg
gaccagcagaagcgtccatttggaacatttcgatccataatggagacactgagtggcaat
cagaacaataataataattatcactcttccagtttaatcaagacctcatcaccctttacc
tcattaggaagaaaagccacagatagcaagggaaattcagcaacttctacaaaaggaaaa
aataaaccagctctttgttccagctacatcagtttttccactcgcatgcagattgaagac
cacctcgataacaatgcatggcataacagctacaatgaaaaacctcagagtttttacagc
aaaaactgttttgaagaaccagagcttcaagaattgttcctttga
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