Thamnophis sirtalis (common garter snake): 106540797
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Entry
106540797 CDS
T06107
Symbol
SALL1
Name
(RefSeq) sal-like protein 1 isoform X1
KO
K19871
sal-like protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106540797 (SALL1)
03036 Chromosome and associated proteins [BR:
tsr03036
]
106540797 (SALL1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106540797 (SALL1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106540797 (SALL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2H2_2
Zf-C2H2_ZNF451
IZUMO
zf-H2C2_5
Zf-C2H2_ZNF451_2nd
zf-Di19
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
106540797
NCBI-ProteinID:
XP_013911522
UniProt:
A0A6I9XCE1
LinkDB
All DBs
Position
Unknown
AA seq
1320 aa
AA seq
DB search
MSRRKQAKPQHFQSDPELASQAPRNGDTQKGQPNRTPKTKDAHVCGRCCAEFFELTDLLQ
HKKICTKNQLVLIVNESSVSPSEAFPPSPPKDHPDERKTNTDNNAGQVEGSNVPERDDKL
DKEETMDTEPSSSSVSKSTSSTSQTVNSTIASSNCSTKGTSALTTSLPQLGDLTMLGNFS
VINSNVIIENLQSTKVAVAQFSQEARCNGTTTHKLAVPALMEQLLALQQQQIHQLQLIEQ
IRHQILLLASQNADVPTTSPNPSQSTVRASANPLSTLSSHLSQQLAAAAGLAQSLASQSA
SIGGLKLLSPLQLPQSNSGNTTIPSSSGLSPSISLATAAITTSSSDKVTTNTGGPPLGNP
AGTVSSSPAFAISSLLSPVSNPLLPQPTSSNNSVFPNPLSNLGTTAEDLSPLSALAQQRK
NKPPNLAAFETKSNSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFS
TKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDNKPV
LSTLTPSVGLPLPPTIPSLTPFIKTEEPQPIPISHPSSSPPSSVKSDSGSIDPAAKNSNG
PLADGEMCALLPSGDKAEESMPSVSSSLNHSVTSPAAESDSSNVVAFTSPLMPLMSEQFK
AKFPFGGLLDGTPASETSKLQQLVENIDKKASDPNECLICHRVLSCQSALKMHYRTHTGE
RPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGG
QIPNTPVTENYPESMESDTGSFDEKTFDDLDAFSDENMEDCPDSSIADTPKSADASQDSL
SSSPLPPEISSIAALENQMKMINAGLAEQLQASLKSVENGSVEGDIMTNDSSSVGGDMES
QSAGSPAISESTSSMQALSPSNSTTDFYKSPGIDDKPLRTLPNDFANGWPVAFANGGALD
LTSGNPEKMVKEEPLGMLFPFRDRGKLKNTACDICGKTFACQSALDIHYRSHTKERPFIC
TVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNSNLGPAQNSSTSSSSSSVVPANSLSSL
IKAEVNGFVHGPPQDHKETLPSLLPSGPLLPSATSPVLLPTLPRRTPKQHFCNACGKTFS
SSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMT
FLGGNPVKFPDMFPKDLAARSGNGDASSFWNQYAAALSNGLAMKTNEISVIQNGGIAPVP
GSLGNGSSSPLSGLTGSLEKFQDSEPNAPLAGLERMAGSENRTSFRLTRFVEDSKEIVTS
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaaacaggcgaagccgcagcatttccaatccgaccccgagctggcctcg
caagctccacgcaacggagacacacagaagggtcaacccaatcggacccccaagacaaag
gatgcccacgtctgtggcagatgttgcgccgagttctttgaactgacggacctgctacaa
cacaagaagatctgtactaaaaatcaactggttttaattgtgaatgaaagctctgtatct
ccttcggaagccttccctcctagccctccgaaagatcatcccgatgaacggaagactaac
acagataacaacgcgggtcaagttgaaggcagcaacgttcccgagcgagacgacaaactt
gacaaggaagaaaccatggatacggagccttcctcttccagcgttagcaaaagcactagc
agtacttcccagaccgtcaacagtactattgcaagcagtaactgctccaccaagggtacc
tcagctcttacaacctctctacctcaactgggagatctgaccatgctgggcaatttctct
gtgatcaatagcaacgtcatcatcgagaaccttcagagcacgaaagtagcggtggcccag
ttctctcaggaagcgcgctgcaatggcaccacaacccacaagttggccgtccctgccctc
atggagcaactcttggctttgcagcagcaacagatccatcagctgcaactgattgaacaa
atccgccaccaaatattactgctggcgtcccagaatgcagacgtgccaacaacgtcgccg
aacccgtcgcagagtacagtacgagcatccgccaaccccttgtcgacattaagttcccat
ttatcccaacagctggctgccgcagccggattggcacaaagcctcgccagccagtctgcc
agcattggtggtctgaaactcctgtctcctctacagctacctcagagcaattctggcaac
actacgattccatccagtagcggcttatctccgagtattagcctagctaccgcagcgatc
acgacgtcatcttccgacaaagtcactacgaacactggtggtccaccacttggcaacccg
gcagggaccgtgtcatcctcgccagcttttgcaataagcagtttattaagccctgtatca
aatcctcttctacctcagcccacttctagtaataactctgtgttccccaatcctttatcc
aatctcggaacaaccgcagaggacttaagcccgttgtctgctttggcccagcagaggaaa
aacaagccgcccaatctagccgctttcgaaacaaaaagcaactcggacgaagccttcttc
aagcataagtgcaggttctgcgcgaaggttttcgggagcgacagtgccttgcagatccat
ttgcgttctcacactggggagaggcccttcaagtgcaacatctgtgggaaccggttttcc
accaaggggaatttaaaagtccacttccaacggcataaagaaaaataccctcacatacaa
atgaacccgtatccggtgcccgagcatttagacaacatccccaccagtacggggatcccg
tatgggatgtccataccgccagagaaaccggtcaccagttggttggacaacaagccagtg
ttatctactttgaccccgtctgttggcctgccgctcccacccacaatcccaagcttgaca
ccgttcatcaaaacggaggagcctcagcccattcctatcagtcacccttcatctagtcct
ccatcttctgtcaaaagcgactctggctccatcgaccccgcggcgaagaactctaacggg
cctctggcggacggggaaatgtgcgctttgctgccctctggtgacaaagccgaagaaagc
atgcccagcgtttcttctagtctgaaccactctgtcacctccccagcggcagaatcggat
tccagcaacgtggttgcttttaccagtccgctgatgcctctcatgtccgagcagtttaag
gctaagtttccatttggagggctgctggatggaacgccagcctcggagacctcaaagcta
cagcaacttgtagaaaacatcgacaaaaaggcaagcgacccgaacgagtgtctcatctgc
caccgggtgctcagctgccagagtgctctgaaaatgcactaccgcacgcacactggcgaa
aggcccttcaagtgcaagatctgtggccgggccttcactacgaaaggcaatctaaagacc
cactatagcgtccatcgtgccatgccgcctttgagggtgcaacattcctgccccatctgc
cagaaaaagttcaccaatgcagttgtgttgcagcagcacatcaggatgcacatgggaggc
cagatcccgaacacgccagtgactgagaactatcccgagtccatggaatctgacacaggc
tcatttgatgagaagacctttgacgacctggatgccttctccgatgagaacatggaagac
tgtcccgacagtagcatagcagacacccctaagtcggccgatgcctctcaagatagttta
tcatcctccccgttgccaccagagatatcaagtattgctgctttagaaaaccagatgaag
atgatcaatgcagggctggctgagcagctacaagcgagtttgaaatccgtggaaaacgga
tcggtcgaaggggacattatgacaaacgattcttcctcagttgggggtgatatggaaagt
caaagtgctggaagtcctgccatttcggagtctacctcttccatgcaggccttatcccca
tccaacagcacaacggatttctacaaatcaccgggcattgacgacaaaccgctacggact
ttaccgaacgactttgccaacggttggcctgtcgcctttgccaacggcggtgcgttggac
ctgacctcgggcaacccggaaaaaatggtgaaggaagagccgctgggcatgttgtttcct
ttccgcgacagaggcaaacttaagaacacggcgtgcgacatttgcggcaaaacgtttgct
tgtcagagtgccttggacattcactacagaagtcataccaaagagagaccgtttatttgc
acagtctgcaatcgtggcttttccacaaagggtaatttgaagcagcacatgttgacacat
cagatgcgagatctaccatcacagctctttgaaccgaactccaaccttggcccagctcag
aactcttccacctcctcctcctcctcctctgtcgtacctgcaaactctctctcgtcgctc
ataaaggccgaggtcaacggttttgtacacgggcctcctcaggaccacaaagagacactg
cccagcttgcttccttcgggacctttgctcccttcggcgacatccccggtcttacttcca
actctgcctcggaggacgcccaagcagcacttctgcaacgcctgtgggaagaccttctcg
tcttccagtgctttgcaaatccacgaaaggacccacacaggagagaagcctttcgcctgc
acaatttgtggaagagctttcaccaccaagggcaaccttaaggtgcacatggggacgcac
atgtggaacagcacccctgccaggcgaggcagacggctctccgtggacgggcccatgact
ttcctcggaggcaaccccgtcaaattcccagacatgtttccaaaagatttggccgcgagg
tcgggaaacggtgacgcttccagcttctggaaccaatacgccgcggccctctccaacggt
ttggccatgaagaccaacgagatctcagtcatccagaacggggggatcgcccccgttccc
gggagcctgggcaatggcagcagctccccacttagcggtttgaccggcagcctggagaaa
ttccaggattcggaacctaacgcgcctctagcgggcctggagaggatggcaggcagcgaa
aacaggaccagcttccggctcacccgcttcgtggaggacagcaaagagattgtaacgagt
tag
DBGET
integrated database retrieval system
