Thamnophis sirtalis (common garter snake): 106540801
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Entry
106540801 CDS
T06107
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog isoform X1
KO
K14764
protein SHQ1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106540801 (SHQ1)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
106540801 (SHQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
106540801
NCBI-ProteinID:
XP_013911526
UniProt:
A0A6I9XB53
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All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MITPVFELSQDPDFLTIIIKVPYARVSEFDLHFEGNSFHFYGKPYFLRLTLPGRVVEDGR
EKASYDDSGIFTIHLPKETPGEKFDGLDMLTALLAPKKSRSAKPLVEEMDAPNENMEEEE
EFYWEIEQTPQKDNLEDSLCPTGSYGFGSQKSGVFRRLQDELNEVVDVKSPDITSASERR
EKRLAAEAAKFDPDHYLADFFEDEAIHRLLNYKPWWVNAYELMMNAQENTSWISFTEDEK
EQLRKFTNRTFLLDKTTSQQVYLSLIDILLAYCYEVCATEGENNVESPWNIRKLSSTLCW
LESFTSISEVLISFGRRVLCYPLYRHFGLVIRAWNDTIMILKLGKSAILKCLLDIHKIFR
ENDPAYILNDLYITDYCIWIQKAKSKNLAALAESVQKAELSKEDLGFELNELETAALLVH
EEEKELKAIDAGNSEQQLPPPSREDASEFEDSGSTSSYETEVSDSDEQESSASEDGKINP
SQCTLLEERTAPLIDDNGLRRDTGTLTLEDSNEKSKLSLQSTSVSGELIEELEKKMQAAV
RLTELPEAAPSLRDDGQDCSSSSQDMGTNCTAQPGGS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgataactccagtatttgaactgagtcaagatccagattttctcacaataattatcaaa
gtaccttatgcacgagtttcagaatttgacctccattttgaagggaattcatttcatttt
tatggaaaaccttactttcttagattgacacttcctggaagagttgtagaagatggaaga
gagaaagcatcctatgatgattcaggaatatttacaattcaccttcccaaagaaactcct
ggagagaaatttgatggcttagatatgttgacagctctgttagcaccaaagaaatcccga
tcagctaaacctttagtggaagagatggatgctccaaatgagaacatggaagaagaggag
gaattttactgggaaatagaacaaactcctcagaaagataacttggaggattccttgtgt
ccaactggttcctatggatttggaagtcagaaatcaggagtttttagacgtctccaggat
gaacttaatgaagttgttgatgttaaaagcccagatataacatctgcatctgagcgcaga
gaaaaacgacttgcagcagaagctgccaagtttgatcctgatcattacctagctgatttt
tttgaagatgaagctattcaccgtctgttgaactataagccctggtgggttaacgcctac
gagttgatgatgaatgctcaagaaaacacttcatggatttcctttacagaagatgagaaa
gaacagttaagaaaattcactaacaggacattcctgcttgataaaacaaccagccaacaa
gtctatctgagcttaattgatattcttttagcatattgctatgaggtctgtgccactgaa
ggagaaaataatgtcgagtcaccatggaacatacggaaattgagctcaactttatgctgg
ttggagagttttactagcatttcggaagtccttatatcctttggaagaagagttctgtgc
tacccactttacagacactttgggttagtgatacgagcctggaatgacacaataatgata
ttgaaattaggtaaaagtgccattttgaagtgtctgctagatattcacaagatttttcgg
gagaatgatcctgcatatattctcaatgacctttacatcacagattactgcatttggatt
caaaaagctaagtcaaagaacttggcagcactcgctgaatccgtgcagaaagcagagctg
agtaaggaggacttgggtttcgaattaaatgagctggaaacagccgcgcttctggtacac
gaggaagagaaagagttaaaagcgattgacgcaggcaattctgagcagcagctgcctcct
ccctcccgagaagatgccagtgaattcgaggactcgggcagcacttcatcatacgagaca
gaagtctctgattcggatgaacaagagtcctcagccagtgaagatgggaaaataaatcct
tcgcaatgcacactcctagaggagaggacagccccacttattgacgataatggattaagg
cgagacacagggactttgacactggaggatagtaatgaaaaatcaaagctttctctacag
tctacatctgtttcgggagaactgatagaggaattagaaaagaaaatgcaagcggcagta
aggctgacggagttgcctgaagctgcaccttctctaagggatgatggccaggactgcagc
agctcttcgcaagacatgggaaccaactgcacagctcagcctggaggatcctaa
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