KEGG   Thamnophis sirtalis (common garter snake): 106540906
Entry
106540906         CDS       T06107                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr03020  RNA polymerase
tsr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106540906 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    106540906 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsr03021]
    106540906 (POLR2D)
   03400 DNA repair and recombination proteins [BR:tsr03400]
    106540906 (POLR2D)
Transcription machinery [BR:tsr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     106540906 (POLR2D)
DNA repair and recombination proteins [BR:tsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      106540906 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 RPN11_C Maelstrom Tfb4
Other DBs
NCBI-GeneID: 106540906
NCBI-ProteinID: XP_013911682
UniProt: A0A6I9XCV4
LinkDB
Position
Unknown
AA seq 142 aa
MAVGGTDIRAVDVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESVEDEQELSEL
FMKTLNYTGRFSRFKNRETIASVRSLLLQKKLHKFELACLANLGPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggtaggaggtactgacattcgcgccgtagatgtggaagaggatgcatctcagctt
gtttttcccaaggaatttgaaactgccgaaacacttctaaattcagaagtgcacatgctt
ctggaacatcggaaacagcagaatgagagtgtagaagatgagcaagaactttctgaactg
tttatgaaaactttgaattatacaggacgcttcagccgcttcaaaaaccgggagacaatt
gctagtgtccgcagcttattgctccagaagaaactccataaatttgaactagcatgttta
gctaatctgggtcctgaaacagctgaagaggccaaagctttaattcccagcttagagggt
cggtttgaagatgaagagttgcagcaaattcttgatgacatacagaccaaacgaagcttt
caatattaa

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