Thamnophis sirtalis (common garter snake): 106540937
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Entry
106540937 CDS
T06107
Symbol
DIEXF
Name
(RefSeq) digestive organ expansion factor homolog
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106540937 (DIEXF)
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
106540937 (DIEXF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
106540937
NCBI-ProteinID:
XP_013911729
UniProt:
A0A6I9X885
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MGKRKARQQRQQLISHLSKKQKKHLKDFGEEHPFYDRVSGKEKPTQICELNENSEQSSSE
NDAESDSEQIPVYHKLLATLKTSVCSDNEDEEDESEDSSQEDTELDSDELGDEKEMENDD
NEIKMPHEESETSLVENSEEEPTGSDALQDLQCEAAEECTDVQLELEFNLETNVIDEECA
DVTTDLKERTPSAKVTDDPFKCHMDKELEEEEIDKSAACTKLTSQVEWPVLGQLVFSSKL
EKFGVINPSKEVDLEHLHLCKPLKSTWPKVNRQLLSAQTKSKDRLFSPLQQELFCIMNSY
KDLFYPGRTTLKNGEELRHVYCLHALNHVLKANTQVLGNNAKRRDQEAGMDEEDAFRDQG
LTRPKVLMVVPFRESALRVVHILIALLESASQKKIDVSNKKRFKGEFGSDPKEKPPNLKR
PEDYEATFAGNIDDHFRIGVAVLQKSIRLYAPFYSSDIIIASPLGLRTVIGAEGENKRDY
DFLSSIEILIIDEADIYLMQNWEHVLHLINHMNLLPLESHGVDFSRVRMFSLNNLSKYYR
QTLLFSALHHPQISSIFNKHCFNYRGQVAVRTVPLTGSISHVVVQLPHVFRKLEADSSVT
VIDARFNFFIDKVLPEYRDAIMTHTLIYVPSYFDYVRLRNYFKKEELNFAHICEYSSKSG
ICRARHLFLSGEKQFLIITERFHFYKRYSIRGIRNLIFYELPTYPHFYSEICNMVKLAGM
EGEATLTCTAFYSKYDAQKLAAVVGVERA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaggaaagctcgccagcagcgccagcaactgatcagccacttaagcaaaaag
caaaagaagcacctcaaggattttggggaggagcaccctttttatgatcgggtttctggg
aaagaaaaaccaactcagatttgtgaactgaatgaaaattctgagcagtccagctcagaa
aatgatgcggagagtgattcagaacaaatcccggtgtatcacaaactactggccacgtta
aaaacatctgtctgttcagacaatgaggatgaagaggatgaatcagaagatagttcacaa
gaagatacagaactggacagtgatgagctcggggatgaaaaagaaatggagaatgacgac
aacgaaataaaaatgcctcacgaagaatcagaaacatccctagtggaaaatagtgaagag
gagcctacaggttcggatgctcttcaggatttacaatgtgaagctgctgaagagtgtaca
gatgttcaacttgaacttgagtttaatctagaaaccaatgttatagatgaagaatgtgct
gatgtcactacagatctcaaagaaagaacaccttctgcaaaagtaacagatgatccattt
aaatgccacatggataaagagctggaagaagaagaaatagataaaagtgctgcatgtaca
aaattgaccagccaagttgagtggccagtactgggtcaattagttttttcttccaagttg
gagaaatttggagtgattaatccaagtaaagaagttgatctggaacatcttcatctttgc
aagccattaaagtcaacttggccaaaagtgaacagacaattgctatctgctcagacaaaa
tcaaaagacagactatttagcccattgcagcaagaacttttctgcattatgaattcatac
aaggatttgttttacccgggaaggactactttaaaaaatggggaagaattgcggcatgtc
tattgcctccatgccttgaaccacgtcttgaaggctaatacacaggtgcttggcaacaat
gccaagcgacgggaccaagaagctggaatggatgaggaggatgctttcagggatcaaggt
ctcactagaccaaaggtgttgatggtggtccccttccgagaatctgctttacgtgttgtc
catattttaattgccctccttgaatcggcaagtcaaaagaaaattgatgtaagtaataaa
aaacggtttaaaggggaatttggttcagacccaaaagagaagccaccaaatctgaaaagg
cctgaagattatgaagccacctttgctggaaacattgatgaccatttcaggataggtgtt
gcggttcttcagaagagcattcggttatatgccccattttactcctcggacattatcatt
gcatctccccttggcttgagaactgtgataggagctgaaggggagaacaagcgagactat
gatttcctctcctcaatagaaattcttataattgatgaagctgacatttacctgatgcaa
aactgggaacatgttttgcacttgattaaccacatgaatctattacctttggaatcgcat
ggggtggatttttcacgagtacgaatgttcagtctgaataacttgtccaagtattatcga
cagacccttctcttcagtgctctccatcatcctcagatcagttctatcttcaataagcat
tgcttcaattacagaggccaggtagctgtaaggactgtaccattgacagggtcaattagt
catgttgtagtacaacttcctcatgtttttcggaagctagaagctgacagctctgttact
gtaatagacgcgaggtttaactttttcattgacaaagtgttacctgagtaccgggatgca
atcatgacccacacactcatctatgttccatcctattttgattatgtgcggctccggaat
tatttcaagaaggaagaactcaattttgcgcacatttgtgaatactccagtaaatcaggc
atttgtagggcaagacatttattcctaagtggagaaaaacaatttctaattatcacagag
cgattccatttttataaaaggtattccattagaggcatcaggaaccttattttttatgaa
ctgccaacctatccacatttctatagtgagatctgcaatatggtaaaattagcaggcatg
gagggagaagctaccttgacttgtactgcattttactccaaatatgatgcccaaaagttg
gctgccgtggtgggtgttgagcgggca
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