Thamnophis sirtalis (common garter snake): 106540992
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Entry
106540992 CDS
T06107
Name
(RefSeq) remodeling and spacing factor 1-like
KO
K11657
remodeling and spacing factor 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106540992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106540992
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
106540992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
WSD
Motif
Other DBs
NCBI-GeneID:
106540992
NCBI-ProteinID:
XP_013911787
UniProt:
A0A6I9XD67
LinkDB
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Position
Unknown
AA seq
1266 aa
AA seq
DB search
MRLQPLGRDKDGLTYWYQLDQEHNVRMYVEEQDDPEGTSWKCIVRSRNELAETLELLKAQ
IDPALLKTQDNSLQESPSTEDEEAKKREGTATQAEGELKVKEEKKEPTEGPPQPCENLPP
PAAPAEEKKIKVEKVEERDIIKLPVIVKLEKPPENRGEVQATKDENDSFKENVKPSKAEA
KEKKPEPKDSREVNSNAERTALEPERIEFCVSVKTPQDVTERTAEENEKLKNDQQAKIPL
KKREIKLTDDFDSPLKAPLRKCITPTKDVSKEDGGKPEEETFKRVPTITDGKFLVNGELG
CEKLVANNRLERLPCPKEEAAVLPKEKNGLGEERVQEGISTIVRTSDVERCILHPTKEAV
GVIVPLREETGPKGSEKQLEAKKSDGVAENLSKAGDPPKIEDSLRVKDSVILSKDSLEKP
TKLPSPKESVLVTDADDLKKTGPSDEKTATLASSDATPSSVSVLSFKKPVVEKEDSDSQI
AFADQRQASQEQAAETPKDSESQEGEQPTTDALPTSVKEPPSETKKESVKTKCKYKLISE
EESSLTENRELTSERQKDGIKLTIRISSRKKNDPLPAKPLNAAAGKEEEVVSVGRILRRS
PRISKPTPKVVETRDQKSEKKRSEEEDEKVASVQKQEKKEDSKKQEKETNSKAHKASRRS
KVRWAGTRTRGRWRYSSNDDSEGSEREGDSEEEKEEEEEEEEEEEEEPAPADDDEPCKKC
GLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVV
LKKKERAERRKERLVYVGISIENIIPPQEPEIPEPVDEKKKESKKSKTKLLERRSTRQRK
CISYRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISNITGHRGKDISTILEEERKESKRP
PRAAALRRKKRRRLNDLDSDSNLDEEESEDEFRISEGSQDEFVISDENVDESEEDQPSND
DSDVGFSRRRPRRHHPRPMRQSRRLQRKTVRKRYSEDDEDEDSEDNISGDSENDASSEYS
DEDYLETRRRRSRRNQKRQVNYKEDSESEGSQKSFRYGKEMRRIHKRRLSSSDSEESYLS
KHSEDDQPARLSKRSVRKRSHTTDEFSEGEDDPEDEGGRPVRKRVNRIETDEEDNIPDAG
KLPSSSPPAEKPLSPPAPQDPVKKPSYRIESDEEDDFDNVSKVESPLDYSLVDLPSTNGQ
SPGKAIENLIGKPAEKAPSTKDSTANATLAPNGTGGGLEAGGPEEDEDELLRVTDLVDYV
CNSEQL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttcagcccctcggccgagacaaagatggtttgacctactggtaccagctggac
caagagcataacgtccgcatgtacgtcgaagagcaggacgatccagagggaacttcgtgg
aagtgcatcgtcagaagccgaaatgagctggccgaaactctggagctcctgaaagcacaa
attgatcctgccctgttgaaaacccaggataactctttgcaagagagtcctagcactgaa
gatgaagaggccaaaaagagggaagggacggcaacgcaagcagaaggcgaattgaaggtg
aaggaagaaaaaaaggagccaacagagggaccgccacagccctgcgaaaaccttccacct
cctgctgccccggcagaggaaaagaagatcaaagtagagaaagtggaagagagagacatc
ataaagctccccgttattgtaaaactcgaaaagcctccggagaaccgcggggaagtgcaa
gctaccaaagacgaaaacgactctttcaaagagaacgtgaagccgtctaaagcggaagcg
aaggagaagaagccggagccaaaagactcccgagaggtgaacagcaacgcggagagaaca
gccctcgaacccgagagaatcgagttctgcgtcagcgtcaaaaccccgcaagacgtgacg
gagagaacagcggaggagaacgagaaacttaaaaacgaccagcaggccaagatccccctg
aaaaaacgagaaatcaagctgacggatgatttcgacagcccactgaaagcgcccttgcgg
aaatgcatcacgccgacaaaagacgtttcgaaagaggacggaggcaaacccgaggaggag
acctttaagagggtccccaccatcaccgacgggaagttcctggtcaacggggaattgggt
tgcgagaaactcgtggcgaataaccgattggagcgtttgccttgcccgaaggaagaggct
gccgttctgccgaaggagaaaaacgggctcggagaggaacgggtccaagagggtatcagc
accatcgtcaggaccagcgatgtcgagagatgcattttgcatcccacgaaggaggccgtg
ggagtgatcgtgcctttaagggaggagacgggccccaaagggagcgaaaaacagctggag
gcgaagaagtcggacggggtggccgagaatctttccaaggcgggagatcctcctaagatt
gaagactctcttagagtaaaggacagtgtgatactttccaaagacagcttggaaaagccc
accaagctaccctctcctaaagagtcggttctggttaccgacgccgacgatttgaaaaaa
actggtccttcggacgagaaaacagcaaccttggccagttcggatgccactccatcttct
gtttcagtcctttcgtttaagaaacccgtggtggaaaaagaagactccgattcccaaatc
gctttcgccgatcaaaggcaagcgagtcaggaacaggcggcggaaacgcccaaggactcc
gaatctcaagaaggagagcagccgaccacggatgcccttccaacctccgtcaaggaacct
ccatccgagacgaagaaagaatctgtaaaaaccaagtgtaaatacaagctgatttccgaa
gaagaaagttctctcaccgagaacagggaattaacctctgagaggcagaaagacgggatt
aagctaacgatccgaatctccagccggaaaaaaaacgacccgctcccggccaagcctttg
aacgcggccgccgggaaggaagaggaggtggtcagcgttggacgcattttaagacggtcc
ccccggatatcgaaaccgactcccaaggtcgtagagactcgcgatcagaaatccgagaag
aaacgaagcgaggaagaggacgaaaaagtggcctccgtgcaaaagcaggaaaagaaagaa
gactcgaaaaagcaagaaaaggagacgaactctaaagcccacaaggcttcccgtcgaagt
aaagtccgatgggccggcacccgaacgcgtggccgatggaggtactcgagcaacgacgac
agcgaaggttctgagcgtgaaggtgactccgaggaagagaaggaggaggaagaggaggag
gaggaagaggaggaggaagaaccagctcctgcggacgatgacgaaccgtgcaagaagtgt
ggccttcctaaccacccagagctgatacttttgtgcgattcctgcgacagcggctaccac
acggcgtgtctccggcctccgctgatgatcattccagatggcgagtggttttgcccccct
tgtcaacacaaattgctctgcgagaagttagaggaacagctgcaggacctggacgtggtc
ttgaaaaagaaggagcgtgcagaacggaggaaggaacgcctcgtctacgtgggcattagc
atcgagaacatcattcctccgcaggagccggaaattccagagcctgtcgatgaaaagaag
aaagagtccaaaaaatcaaagacgaagctgctcgaaaggaggtctaccaggcagcggaag
tgtatcagctacaggtttgatgagtttgatgaggccatcgatgaagccatagaagatgac
atcaaggaggctgatggaggaggtgtcgggagagggaaggacatctctaacatcacgggg
catcgaggcaaggatatctccaccattctggaggaagaaaggaaggaaagcaaacggccc
cccagagccgctgccctccgacgcaagaaacggcggcgactgaatgacctggatagtgac
agcaacctggatgaagaagagagtgaggatgaattcagaatcagtgaaggatctcaggat
gagtttgtgatatcggacgaaaacgtagacgaaagtgaagaggatcagccctcaaacgac
gacagcgacgtggggttctccaggcgtcggccgagacggcaccatcctcggccaatgagg
caaagcagacgtctccagaggaaaacggtcagaaaaaggtactcggaagatgatgaagat
gaagactctgaggataacataagtggcgactccgaaaatgacgcttcttccgaatacagc
gatgaagattatttggaaacgagacgacgaagatctcggcggaatcagaagcggcaagtg
aactacaaggaagattcggaaagcgaggggtctcaaaaaagcttccgatacgggaaagag
atgaggagaatacacaagcggaggctttctagttcagacagtgaagagagctacctgtct
aaacattcggaggacgaccagccggccaggttgtcaaaacggtcggtccgcaaacggagc
cacaccaccgacgagttctcggaaggcgaggacgacccggaggatgaaggaggccgtccc
gttcgcaagcgcgtgaaccgcatcgaaacggacgaggaagacaacatccccgacgccggc
aagctgccgtcgtcatcaccacccgccgagaaacccttgtcccctcccgccccgcaggac
cccgtcaagaaacccagctaccggatagaaagcgacgaggaagatgactttgacaatgtg
agtaaggtggaaagccccttggactacagcttggtggatttgccctccaccaacggacag
agccccgggaaagccatcgagaacttgattggtaagcccgccgagaaagccccctcgacc
aaggacagcacagccaatgccactttggcacccaatgggacggggggcggcctggaggcc
ggcggaccagaggaagacgaggacgaactcttgcgggtgactgaccttgtggattacgtc
tgtaacagcgaacagttataa
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