Thamnophis sirtalis (common garter snake): 106541004
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Entry
106541004 CDS
T06107
Symbol
PUM1
Name
(RefSeq) pumilio homolog 1
KO
K17943
pumilio RNA-binding family
Organism
tsr
Thamnophis sirtalis (common garter snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
SAWADEE
Motif
Other DBs
NCBI-GeneID:
106541004
NCBI-ProteinID:
XP_013911797
UniProt:
A0A6I9XD75
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKQHSQETANPNMPVVLTSGTGSQAQTQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGSYNNSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQGFHVNNEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDAENDDNDKGDKKNKGTFDGDKLGDLKEEGDVMDKANGLPVQNGIDADAKDFSRTPG
NCQNSANDVDLLGPNQNGSESLAQLASTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGLA
PAAFVPNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVAPWGVYPASLFQQQAAA
AAATNSSNQQTSQQTQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNSALAFGQ
GLAAGMPGYPVLAPAAYYDQTGALVVNTGARNGLGAPVRLVAPAPVIISSSAAQAAVAAA
AASANGAAGGLAGTTSGPFRPLGTQQPQPQQQPTSNLASSSFYSNNSLTSNSQSSSLFSQ
GSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSTDLYKRTSSN
LTPIGHSFYNGLGFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGGLTNGSGR
YISAAPGAEAKYRSASSASSLFSPSSTLFPSSRLRYGMSDVMPSGRSRLLEDFRNNRYPN
LQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQ
KFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQNEMVRELDGHVLK
CVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTL
PILEELHQHTDQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVE
KCVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHK
IRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctctggcaggactctttcagcccc
cacctgaaacagcacagtcaagaaacagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcccaggctcagacacagccagctgcaaatcaagcccttgcagcagggacc
cactccagccctgttcctggatccataggggttgcaggtcgctcccaggacgacgcaatg
gtggattacttctttcagaggcagcatggtgagcagcttgggggaggcggaagtggtgga
ggcagctataataacagcaaacatcggtggcctactggggataacattcatgctgaacat
caggttcgatccatggatgaattaaatcatgattttcaagcacttgctttagaaggaagg
gcgatgggggagcaacttttgccagggaaaaaattttgggaatcagatgattcaagcaaa
gatggaccaaaaggaatatttttgggcgatcagtggagagacagcgcttgggggacatca
gatcattctgtttcccaaccaatcatggttcagagaagaccaggtcaaggttttcacgtg
aataacgaagttaattcagtgctgtctccacgatcggaaagtggtgggcttggtgttagc
atggtagaatacgtgttgagttcatcccctggggactcctgtctcagaaaaggaggattt
ggcccaagggatgcagagaatgatgacaatgataaaggagacaagaaaaataagggtaca
tttgatggtgataaattaggtgatttgaaggaagaaggcgacgtaatggacaaggctaat
ggtttgcctgtgcaaaacggaatcgatgcggatgcaaaagattttagcaggacacccgga
aactgccagaactctgccaatgatgtggatcttttagggccaaaccagaatggatcagaa
agcttagcccagttagctagtactaatggtgccaagcccgtggaggatttctctaacatg
gagtcccagagtgttcctctggatcccatggagcatgtgggcatggagccacttcagttt
gattactctggtacccaggttcctgtggattctgctgcggcaactgtgggcttatttgat
tacaactcacaacaacagctgttccaaagaccgaatgcactcgctgtccagcaactgaca
gcagcccaacaacagcaatacgcattagcagctgcccatcagcctcacataggtttagcc
cctgctgcctttgtgcccaacccttacatcatcagcgccgctccgccagggacggatccc
tacgcagcaggacttgcggcagccgcaactttagggcctgccgttgtcccccatcaatat
tatggagtagctccctggggagtatatcccgccagtcttttccagcaacaagccgccgcc
gccgctgccacaaactcctccaatcaacaaacctctcagcagacccaacaagggcagcag
caggttctccggggaggagccagccagcgccctttgaccccaaatcagaaccaacagggc
cagcagacggatcctttagtggctgcagcggcagtgaattcagctcttgccttcgggcag
gggctcgcagcaggaatgccaggttacccagtcctggctcctgccgcctattatgaccaa
acaggtgctcttgtggtgaatacgggggcaaggaatggcctcggagctccggtacgactg
gtagctcctgctcctgtcatcatcagttcctcagctgcacaagcggcggttgcagctgct
gcagcttcagcaaacggcgctgctggtggcctcgcaggaacgaccagtggaccatttcga
cctctcgggactcaacagcctcagcctcagcaacagcccaccagcaacttggcctccagc
tccttttacagcaacaattccctcactagcaattcgcagagcagctcgctcttttctcag
ggctcggcccaacctgccaacacttccctcggctttgggagcagcagttcccttggtgct
accctggggtctgcgctgggaggcttcggaacagcagttgccaattccaacacaggcagc
ggttctcgcagagattccctcacaggcagcactgatctctacaagagaacatccagcaat
ttgactcctataggacatagcttttataatggccttggattttcctcttcaccgggtccg
gtaggcatgcctttgcctagtcagggacctggtcactctcagactcctccaccatctttg
tcttctcatggctcctcttcaagcctaaaccttggaggtctcacaaatggaagtggccgt
tacatctctgctgcccccggagctgaagccaagtaccggagtgcaagcagcgcttccagt
ctcttcagtcccagcagcaccctcttcccgtcctcgcgtttgcgctacgggatgtccgat
gtcatgccctccggccgcagcaggctgctcgaagacttccgtaataaccggtacccgaac
ctgcagttgagagagattgctggtcacattatggaattttcccaggatcaacatggatca
aggtttatccagcttaaactggaacgtgccaccccagctgaaagacagcttgtcttcaat
gaaatcctacaggcagcctatcagctgatggttgatgtctttggaaattatgtaattcag
aaattttttgagtttggcagcctagaacagaagctggctttagcagaacgcatccgtggc
cacgtcctctccctggctttgcaaatgtacggctgccgagttatacagaaagctcttgag
tttattcccccagaccagcagaacgagatggtccgagaactggatggccacgtcttgaaa
tgtgtaaaagaccagaatggaaatcatgttgtgcaaaaatgcattgaatgtgtgcagcca
caatccttgcagtttataattgatgcatttaaggggcaggtgtttgccttgtcaacccat
ccctatggctgccgggtcattcagaggatccttgaacactgtctacctgaacagaccctc
cctatcctggaagagcttcatcaacacacagatcagcttgtgcaggatcaatatgggaac
tatgttatccaacatgtacttgaacatgggcgacctgaagataaaagcaagatagttgca
gaaattagaggcaacgtgcttgtactgagtcagcacaaatttgccagcaatgtggtggag
aaatgtgtcacgcatgcctcccgcactgaacgagccatgctgattgatgaggtgtgtact
atgaacgacggccctcacagtgccttatacaccatgatgaaagatcagtatgccaattac
gtggtacagaaaatgattgatgtggcagagccggcccaaaggaagattgtgatgcacaag
atccgacctcacattgccactctccgcaaatacacgtacgggaaacacatcttggccaag
ctggagaagtattacatgaagaacggggttgaccttgggcctatttgtggaccacccaac
ggcatcatctga
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integrated database retrieval system
