Thamnophis sirtalis (common garter snake): 106541133
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Entry
106541133 CDS
T06107
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi-like
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04080
Neuroactive ligand-receptor interaction
tsr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106541133
04082 Neuroactive ligand signaling
106541133
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106541133
Ion channels [BR:
tsr04040
]
Ligand-gated channels
GABA-A
106541133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
106541133
NCBI-ProteinID:
XP_013911949
UniProt:
A0A6I9X8R4
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MYRSYYFSSLVWLFLLCQGKFILCQKVHSADYPVASYLPGFGNLTKGYNKYLRPNFGGKP
VTIAMTLDVASISSISESDMDYTATIYLRQRWTDPRLVFQGNRSFTLDARLVKYLWVPDT
YIVESKRSFLHEVTAENRLIRLFSNGTVLYALRITTTVACNMDLSKYPLDTQTCKLQMES
WGYDENDVRFVWLRGNDSVHGLENVRLSQYTVEHFYTLVTMSRQETGIYPRLVLQFELKR
NILYFILETYVPSSLLVILSWVSFWITLDSVPARTCIGVTTVLSMTTLMMGSRKSMTNAN
GFIKAIDIYLGICFSFIFGALVEYAVAHYITSQKHSANETQKAFVKDATRETENKTTIDI
FNTPLTASFSGGIFWKKHLW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcagttattatttctccagccttgtgtggctctttcttctatgtcaaggaaag
tttattttgtgtcaaaaagttcacagcgctgactatccagttgcatcctacctccctgga
tttggaaaccttactaagggatacaacaaatatctacggccaaattttggtggaaaacct
gtgacaatagcaatgacccttgacgttgcaagtatttccagcatttcagaaagtgatatg
gactatactgcaacaatatatttgcgacaacgctggaccgatccccgtctcgtttttcag
ggaaaccgaagttttactctggacgcccggctggtgaaatatctgtgggtacctgacact
tatattgtggagtcaaaaagatctttcttacacgaagttacagcagagaatcggcttata
cgcttgttctccaatgggacagtcttgtatgctttgcgaatcaccaccactgttgcatgt
aacatggatctgtccaaatatccactggatacacagacttgtaagctgcagatggaaagc
tggggatatgatgaaaacgatgtccgttttgtgtggctgaggggaaatgattctgtccat
ggccttgagaacgtgcgactctcacagtacacagtggaacatttttacactcttgtaacc
atgtcgcgtcaagaaacaggtatttatccaagactggtcctgcaatttgagctcaagaga
aatatcctttattttattctggagacttatgtgccaagcagtctgcttgtcattttgtct
tgggtttctttctggatcaccctggattcagttcctgcacgaacgtgtattggtgtaacc
acagtgctctcaatgacaactttgatgatggggtcccgaaagtcaatgacaaatgccaat
ggtttcataaaagccattgacatttatctgggcatctgcttcagctttatatttggggca
ttggtggaatatgcagtagctcattacatcacatcacagaaacattcagctaacgagacc
caaaaggcttttgtaaaagatgccaccagagaaactgaaaataaaaccaccatcgatata
ttcaatacgccactcactgccagtttctctggtggcatcttttggaaaaagcacctttgg
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