Thamnophis sirtalis (common garter snake): 106541199
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Entry
106541199 CDS
T06107
Name
(RefSeq) telomerase protein component 1-like
KO
K11127
telomerase protein component 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsr03032
]
106541199
DNA replication proteins [BR:
tsr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106541199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
DUF4062
DUF5920
NACHT
NBCH_WD40
AAA_22
WD40_like
AAA_16
APAF1_C
nSTAND1
eIF2A
AAA
DUF2828
CDC45
FAM60A
Nop14
Motif
Other DBs
NCBI-GeneID:
106541199
NCBI-ProteinID:
XP_013912038
UniProt:
A0A6I9XMP2
LinkDB
All DBs
Position
Unknown
AA seq
1929 aa
AA seq
DB search
MYCPTDDKNDNQKSPMTVRDLAILLASMLYSVCEQAKVFLCNFSDIVGAIPMTGSVLKDV
QTIQSVYGTIYYSDDWMAPDVIKDFLIRREHVDTILLLSNDVEELSGSCLHLYRQHVAPD
CLYINICAEPGGKRTFKSRKDVIIHGFSEQMFRFMSECGNSRFLEHVGKVDEIHGLPPQQ
RTATDQQEPGVVSLVPVPQSRWRSVRIFVSSTFRDMHGERDLLIRSVFPELRARAARFCL
AIQEIDLRWGITEHESQRNKQVELCLSEVSRSDLFIGILGQRYGQVPKETSLPEEPQYEW
VKTYPSGRSITELEAVQFLNGNHDPTAESRAFFYLREPDFLGSVPEAWKKDFGAESEEAA
QRMSDLKEHLRKHGSLAAFSSYGCEWGGVAQGQPFVKGLEDFGHRVLQDVWKCLQNHFIE
GGESELPTGSKEEEGNTLQESFQESQQRRFCARTKLLNTTAAQMRGGKLYVVSGEPGQGK
TVFLAALAEKLRKMVPLHGEGPPPKYHVVAHFTKAGPNQTKAQVVLDHICALLRKLLENP
PTPPRSYRGLVTQFECLLHAVAKLLKRRQSLVLLIDGADLIHTAGGELVSDWLPENMPQR
VSLVLSLSAESMLLESLKQRTDAVFIPLEPLAPPDRAAIVRKDLALHGKKLEESPFNNQM
RLVLLKRGSRQPLYLSLLIQDLRLFALYEKLSERIQKLPISLPLMMQHLLGCMEQDHGLE
LVAITLVSLWASRDGLMEQDLYSVLAMWKELNGTTVTLEKAINAGRHVGSFPTALFFDLL
RSLRGLLGACGSPSELPGSRLQLCGAPLRTAVERRYLKKTGLEHTAHVFLAAHWWKLSDP
DGSRTFQKSEAEALTALPYHLVQSGHLDVLASFLTDLTIIGAHLHLGLLRSLSEAHALYA
TAAGSEASEEVNLFSDFLQRNFGLLSQNPLLLLQQAANEPSSSGLCIQAQVALQKCGKPF
LKWINKPEKAQQTRSLVLNLPSTPSSVSLAPSGKLAIVGTVEGTLHLVEMNTGQEQKSLL
TSCDGISACAFLSETTVCLGAFNGRFELWSLREGCRILSKDAHKAQITDCCINSDCKLLA
SVSLDGTLKLWEAARGHVLHQWDFSCPLNCVTFHPNSQLVAVGGWDRSVAVLDTNGMSKI
SVMKDHDSSVHCISFSSTGKVLAAATLAGSITLWSWQEAIILGSFKAHSGCTSVARFLSN
EKLLTAGEDCKVQISKGHLGQFWTTLGSRILSPALCMASNLDGSQLAVGHHSDGIWIYSQ
PWRFQTTPVHLQGSDVAVCSLAWLHHVFLVAGLGDGSLCVWKTFESSSHCCHQFKAHEKA
VMGLAVSDKLVASVSDDFTVGLWLSETLRPGPALQAGISPLSILRGHTSGVTCCSFSLDG
NYLATGSKDRALFLWDVRDPLQKAPSLLRSLLFCHQDWISSCAWIGTMLLSGSNDGTVCL
WDMTTNECVQKFLGHQSPICGITTEKDHVISMGRDGMLITWNLQGVEETRFLAHPSQTNH
CTGFRDPWQKDFMLAAAGADGTVKIWRPLTIEQPQVLFGHSASVCAAAATSSSFLTISKD
KSVRIWAIPKTDADPECLPPHQGAVTAVAWSPDGNLAASGGEHGDLIVWQGGEILGMAKV
GPGCISALTFHSSQTILVACGGISLWDISDSTQNVKAVSLMRRRTLWQTKGVSVLCMGML
PTLGASVCGLSDRELLLLLPGDDNFETFTNMFPRCYTDSNPFNISPSDEEQEEVLHMWHT
MEKPGLIKLNLGKNKKATIIKDIKWTPNKPSSFVTVARLIKDNLLLYGDTEGFLWSQNAQ
IEEEREIEEQETDDEDEDEEDEGEEEEEKEDEEKEEAEKEEEAEEEVEKEEEEEDASKDW
QKRKIHCDTITALHLVGDRIVTASRDRDVKIWDGSTMKLVSVSERCWAEVRQMLSLTSPY
YPSVQLSFP
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atgtattgcccaactgatgacaagaatgacaaccagaagagtcccatgacggtccgagac
ttggccatattgctggcctccatgttatattcggtctgtgagcaggctaaggttttcctc
tgcaacttttcagatatcgtgggggctattcccatgaccggttctgtgctgaaggatgtg
caaaccatacagagcgtgtacggaacaatttactacagtgatgactggatggcaccggac
gtcatcaaggatttcttgattcggcgggaacatgtggatacgattctcttgctaagtaat
gacgttgaagaacttagcggttcttgtctccatctctatcgccaacatgttgcccccgat
tgcctttacatcaatatctgtgctgagccaggggggaagagaacttttaaatccaggaag
gatgtaataatccatggcttcagtgagcaaatgttcaggtttatgtctgaatgtggcaat
tcccgattcttggaacatgttggcaaagttgacgagattcacggcttgcccccgcaacag
agaacagcgacagatcagcaggaacctggagttgtgtccttggtacccgtgccccagagc
aggtggcgctctgtgaggattttcgtctcctctactttccgggacatgcacggtgaacgt
gaccttcttattcgctccgtttttcctgagcttcgcgcacgagccgccaggttctgcttg
gcgatccaggagattgatttgcgctggggaatcacggagcatgagagccagagaaataag
caggtggaattgtgtctgtccgaagtctcccggagcgaccttttcattggaatccttgga
cagcgctacggacaggtcccgaaggagacttccttgccggaggagccgcagtatgaatgg
gtgaaaacatacccatcaggccgctccatcaccgagctggaggctgttcaattcctgaat
ggcaaccatgaccccacagcagaatctagggcattcttctatctacgagagcctgacttt
cttggctccgtaccagaagcgtggaagaaagattttggagctgaatcagaagaagctgcc
caacgcatgtctgatttgaaggaacatctcaggaaacatgggagcttggctgcctttagc
agctatggctgtgagtggggtggagttgcccaaggccagccttttgtgaaaggccttgaa
gattttggccacagagtcttgcaggatgtgtggaaatgcctccagaaccacttcattgag
ggaggtgaatctgaactcccaacaggctcaaaggaagaagaaggaaacactctgcaagaa
tctttccaggaatctcagcaaaggagattttgtgcccggacgaagcttctgaataccaca
gcagctcagatgcgcggtggcaagctttatgttgtgagcggtgaacctggccagggaaag
acagtttttttggcagcccttgcagaaaagctcaggaagatggtcccgctgcacggagaa
ggccctcctcccaagtatcatgttgtagcccatttcaccaaagcgggacccaatcagacc
aaagcccaagttgtgctggatcacatctgcgccttgcttaggaagttactagagaaccct
ccgaccccacctagaagttacagagggcttgtaacccagtttgaatgccttctccacgcg
gtggccaagttgctgaaacggcgccagtccttggtgcttttgatcgacggagctgacttg
atccacactgctggaggagagctggtatctgactggctgcctgaaaatatgccccagcga
gtcagcctggttctcagcctttctgcggagtccatgttgcttgaatccctgaagcagcgg
acggatgctgtcttcattccccttgagcctttggcccctccagaccgggctgccatcgtc
cgcaaagatttggccctgcatgggaaaaaattggaggagtcgcctttcaataaccagatg
cgactcgtgcttctcaaacgtggctctcgccagcctttatacctgagcttgctaatccag
gacctgcggctttttgccctctacgagaagctctcggaacggatccagaagcttcccatc
tctcttcccctgatgatgcaacacttgctgggttgcatggagcaagatcacgggctggag
ctggttgctatcactctagtgtctctctgggccagcagggatggactaatggaacaagat
ctctattctgtccttgctatgtggaaggaattaaatgggactaccgtaaccttggaaaaa
gccattaatgctggaagacacgttggcagtttccccacagctctcttctttgacctgctg
cggagcctgaggggtcttcttggagcttgcggttccccttcggagctcccaggttctcgg
ctgcaactttgcggcgcccccttaaggacggcggtagaacggcgctacttgaaaaaaaca
ggactggagcacactgctcatgtgttcttggcagctcactggtggaaactttcagaccca
gatggctcccggaccttccagaagtctgaggcagaggcattaactgctctgccataccac
ttggtccaaagtggccatttggatgttctggcttctttcctgactgatttaacgattatc
ggtgctcatcttcatctcggcctcctccgtagcctctctgaagcccatgcactctacgca
acagctgctggctcagaagccagtgaggaagtcaacttattctctgactttttgcaaaga
aactttgggctgctttcccagaatcctctactgctcttgcagcaggcagctaatgaaccc
agttcctcaggcctttgcatacaagcccaggtggcgctccagaaatgcgggaaacctttt
ctgaaatggattaacaagcctgagaaggcccagcaaaccaggagcctcgttttgaacctt
ccttccactccttcatctgtttctcttgctccttcgggaaaactggccatcgtgggtact
gtggaggggacattacatctggtagagatgaatactggacaggaacagaaatccttgctg
acctcttgtgatggaatctcggcctgtgccttcttgtctgaaacaacggtttgtctcggg
gcattcaatggacgctttgaactctggagcctgagagaaggatgcaggatcctgagcaag
gacgctcacaaggcccaaattacagactgctgcatcaattcagattgtaaactattagct
tcagtatcactggatggcactcttaagctctgggaagctgcccgaggacatgtactccac
cagtgggacttctcgtgccctttgaactgcgtgacctttcatccaaacagtcagttagtg
gctgtcggtggatgggacagatcggttgctgtcttggatacaaatggaatgagcaagatc
tcggtcatgaaggatcatgattcctccgtccactgcatttccttctcttctactgggaaa
gttttggcggcggctactttggctggttccatcaccctgtggtcgtggcaggaggccatc
atcctgggctcattcaaggctcactctggatgcacctcggtggctcggttcctttccaat
gaaaagcttctcacagcaggagaagactgcaaggttcagattagcaaaggacacttgggg
caattttggaccactttaggatcaagaattctttccccggccctgtgcatggcctcaaac
cttgatggaagccaactggcggtgggacaccattcagatggcatctggatctacagccag
ccttggcgctttcagacaaccccggttcatttgcaaggaagcgatgtggccgtctgtagc
ctggcttggttacaccatgtatttttggttgcgggcctcggtgatgggtccctttgtgtc
tggaagacttttgagagcagctcccattgctgccatcagttcaaggcccacgagaaagct
gtgatgggccttgcggtgtctgataagctggtggcttctgtctcagatgatttcaccgtt
gggctgtggctttcagagaccctgagaccaggacctgccttgcaagccggcatctcacca
ctctccatcctccgtggtcacacttctggggtgacctgttgttccttcagccttgacggc
aactaccttgctaccggaagcaaagaccgggccttgtttctatgggatgtaagggaccct
cttcagaaggctccctctctcttgcgctccctgcttttctgccaccaggactggatttcc
agctgtgcttggattggcaccatgttgctctctggctccaatgatggtaccgtttgtctc
tgggatatgacaactaacgagtgtgtccagaaattcctggggcaccaaagcccaatctgt
ggaatcacaactgagaaagaccatgtcatctccatgggcagagatgggatgctgataaca
tggaacctccagggagtggaagaaactcgcttcttggctcacccgagccagaccaatcac
tgcactggcttcagagatccatggcagaaagactttatgttggctgcagctggtgctgat
ggcactgtgaaaatttggagacccttgacaattgaacaacctcaagtccttttcggacac
tctgcttctgtctgtgcggctgctgctacctcatcgtcattcctgaccatctccaaagac
aagtcagtccgcatatgggccatccctaaaactgatgctgacccggaatgcctgcctcct
caccagggtgctgtcacagctgtggcttggtctcctgatgggaacttggctgcttccggt
ggggaacacggtgacctgattgtctggcaaggaggagagattttggggatggcaaaggtt
ggccccgggtgtatcagtgctcttactttccattcttctcaaacaatccttgtggcttgt
ggtgggatcagcctttgggatataagtgacagcacgcagaacgtcaaggcagttagcttg
atgcgtaggagaaccttgtggcaaaccaaaggagtttctgtcctgtgcatggggatgctc
cccactctgggtgcttcggtttgtgggctaagtgatagagaattgttgcttcttctacct
ggagatgacaatttcgagacattcacaaatatgttcccacgctgttacactgattctaat
cccttcaatatatccccatctgatgaagagcaagaggaggtcttacatatgtggcacacc
atggagaaaccaggcttgataaagttgaatttgggcaagaataaaaaggccacaatcatt
aaggacatcaagtggacaccgaacaagccttctagcttcgtcacggttgccaggctcatc
aaagacaacttactattatatggggacacagagggatttctctggagtcagaatgcgcaa
atagaggaggaaagggagatagaggaacaggagacagacgatgaagatgaggatgaagaa
gacgaaggagaagaagaagaagaaaaagaagatgaagagaaggaggaggcggagaaggaa
gaggaagcggaggaggaagtggagaaagaagaggaagaggaagacgcatctaaggactgg
caaaagaggaagatccactgcgacacaattacagctttgcatctagtgggagacaggatt
gtaacagcatcccgcgaccgggatgtgaagatttgggatggcagcacgatgaagctggtg
agtgtctctgaacgatgctgggctgaagttaggcagatgctgtcactgacctcaccttat
tatccctcagtgcaactttcatttccctaa
DBGET
integrated database retrieval system
