Thamnophis sirtalis (common garter snake): 106541233
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Entry
106541233 CDS
T06107
Symbol
RNASEL
Name
(RefSeq) 2-5A-dependent ribonuclease
KO
K01165
ribonuclease L
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04621
NOD-like receptor signaling pathway
tsr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106541233 (RNASEL)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106541233 (RNASEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Pkinase
Ribonuc_2-5A
PK_Tyr_Ser-Thr
Kdo
Ank_KRIT1
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
106541233
NCBI-ProteinID:
XP_013912088
UniProt:
A0A6I9XMV3
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MAAKLNSAVKKGDLKLVQQLLEDGADINAKVECGWTPLHSAVQRKSEEIVNFLLENGADP
LARKDNGATPFILAGVIGNVKLLKLFLDKGSCINEYDINGFTAFMEAACYGHKEALEFLY
QNGADPNQRREVDEIKKAVKKGGATALMDAASHGHFALVKILVEEMGADVNICDNQDGNA
LIHALSEDKGRKGREDSALFLLKNKIDANKRDVNGKTVLILAVERESLDLVEAILKLDEV
DLDDADENNETALHVAVEKKNKDISKLLCEKGARVDDDVLDIARRNYQTDMIELLQKYQS
EDTPRQPEIYKEFSSNRWKSKLQKLNQMHRPMIGKLKIFQYQDLWIQKTTQGGVYLGFYD
GKEVAVKVFWKAAENAKREKACLEKCQTSKYLVKFCGSEERKSCLYLCLSLCEKNLQEYF
KEESNATMESKKILKIIFEAVNELHAFRFGHQELHPSNILIDVTGKIFLADFDKSREITD
DTKYSVISEDLKGLQKLILYVVMRGQWDFEDLPTEYPDTVQENWKEIEDLRRKLEVSDQT
PLDDSLLEKLIYHPYFWPKETKYRVLSKIWNEIRAAHATKKDKKVNVLKSKDDIVSALKS
EDDPFMDWKTKIDKKVLDSMIFLDKDKGNKKSNKKVKRLYRCGVADLLKLIRNMGEHYSE
KDAEVHEIIRDPADYFLNLFPDLTIYVYQRLCNSDYSKYFPNPNNSS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaattgaatagtgctgtgaaaaaaggtgatcttaagcttgttcaacagctg
ttggaagatggagcagatattaatgcaaaggtggaatgtggctggacacctcttcatagt
gcagtacaaagaaagtctgaagagattgttaactttctactggaaaatggggctgatcca
ttagctaggaaggataatggtgccacaccttttattttagcaggagtgataggtaatgtg
aagcttttgaaactttttcttgataaaggctcatgcattaatgagtatgacatcaatggc
ttcaccgcattcatggaggctgcttgttatgggcacaaggaggccctggaatttttatat
cagaatggggcggatccaaatcagcgccgtgaagttgatgagattaaaaaggctgtgaaa
aaaggaggtgccacagctctaatggatgctgccagtcatggccattttgctctggtcaaa
atcttggtcgaggaaatgggtgctgatgtaaatatctgtgacaatcaagatggaaatgca
ttgattcatgctctctctgaggacaaaggcagaaaaggcagagaagactcggcccttttc
cttttgaaaaacaaaattgatgccaataagagggatgtaaatgggaaaacggtgctcata
ttggctgttgaaagagaaagcttggatcttgtggaggccatattaaaattagatgaagtt
gatcttgatgatgctgatgaaaataacgaaacagcattgcatgtagcagtggagaagaaa
aacaaagacatatcaaagctactatgtgaaaaaggagcaagagtagatgatgatgtcctg
gatattgcccgtagaaattaccaaactgatatgatagaacttcttcagaaatatcaatcg
gaggacactccaaggcagccagaaatatataaggaattctctagcaatcgttggaaatca
aaactccagaaactcaatcaaatgcatcgtcctatgattggcaagctcaagatctttcaa
tatcaagatttatggatccagaagaccacccaaggaggggtctacctgggattctatgat
ggcaaagaggtggctgtgaaggtattctggaaggcggcagaaaatgccaagcgagaaaaa
gcgtgcctcgaaaaatgccaaaccagcaaatacctggtgaaattttgtggctcggaagag
aggaagtcctgcctctacctgtgcctctccttgtgcgaaaagaatcttcaagagtacttc
aaggaagagagcaacgcaactatggaaagcaagaagatccttaaaataatatttgaggct
gtaaacgaacttcatgcatttcgatttggccatcaggaattacacccaagtaacattttg
atagatgtcactggcaagattttcctagcagacttcgataagagcagagaaataactgat
gatacaaaatattctgtaatctcagaagatctaaagggtctccaaaaacttatcctgtat
gttgtgatgagaggtcagtgggactttgaagatttgcctacagaatatccagatactgta
caggaaaattggaaggaaattgaagacctccgaagaaaactggaagtctctgaccaaact
cccctagatgacagtctactggaaaagctgatctatcatccatacttctggcccaaggag
acaaagtacagggtgttaagcaagatctggaatgagatacgtgcggctcatgcaacaaag
aaagataaaaaagtgaatgttttgaaatctaaggatgacattgtgagtgctttgaaatct
gaggatgatcctttcatggactggaaaacaaagattgataaaaaagtattggactctatg
atttttctggacaaagataaaggcaacaagaagagcaacaagaaggtcaaaagattatat
agatgtggtgtagcagatttattaaagttgattaggaatatgggcgaacactactctgaa
aaggatgctgaggtgcacgaaataattcgggatcctgcagactattttctgaacctcttt
ccagatttaaccatttatgtctatcagcgtttgtgtaactcggactacagcaaatatttc
ccgaatccaaataattcttcataa
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