Thamnophis sirtalis (common garter snake): 106541243
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Entry
106541243 CDS
T06107
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
106541243 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106541243 (ERCC6)
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106541243 (ERCC6)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
106541243 (ERCC6)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
106541243 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_14
HDA2-3
Motif
Other DBs
NCBI-GeneID:
106541243
NCBI-ProteinID:
XP_013912099
UniProt:
A0A6I9X934
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MPREYHMGDHGEGRALENKAPSAEASLGPLRKGPSLLIDRQQIRSVAPKDQALELRGLLG
VEVYDQEVLEHGVLQQIDKAIGEAAEGRPLHDAPETGDQAELEGVGPSASSPKPSATNHT
EQIGPQAKEDIGRKLDSAKEQNCNKEQEFKKMKTKQKHLQNAGEEEDPEDGTAGDHEAKE
SRDGLGGHFAPGPSSLGRMLMSAQEETEWEKLIRTGQMTPFGTKMLPKEERKPRRIMLNE
TSGFEKLLADQEKLLSQRKKTPFRKGAQQKARGSQAKSPASLTKGRRSKGPPEAAGPLRR
QQEEEQAVCLQAKAKLPQAGESEKREQQEEWEASGCRGSREDLSLSEEEEEGLGVNRPVS
WEDPLKQEDHSDDDFFPSSSEEDEGKEGEGLTRRRRIKRYKDDGNEDYYKQRLRRWHRQQ
LRDRKGQRQSTAEESDESDAEFLEGFKVPGYLFKKLYKYQQTGVRWLWELHCQQVGGILG
DEMGLGKTIQIIVFLAGLSYSQIRTRGTNYRHRGLGPTVIVCPTTVMHQWVKEFHAWWPP
FRVAVLHETGSYADKKVKLIREIVACNGILITSYSYIRLLQENLQRHNWHYVILDEGHKI
RNPKAAVTLACKQFSTPHRIILSGSPLQNHLKELWSLFDFVFPGKLGTLPVFLEQFSVPI
TMGGYSNASPVQVKTAYKCACILRDTINPYLLRRMKADVQMSLSLPDKNEQVLFCRLTAE
QQELYKKFIDSKEVYQILNREMQIFPGLIALRKMCNHPDIFSGGPKVLKGTPEEDLKEED
QFGFWRRSGKLIVVESLLKIWHKQSHRVLLFTQSRQMLHILEEFLKQRNYSYLKMDGTTT
VASRQPLIGRFNEDASIFVFLLTTRVGGLGINLTGADRVIIYDPDWNPSTDTQARERAWR
IGQTRDVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILKDPKQRRFFKSNDLYELFTLSTP
DGAQGTETSAIFAGTGSDVPAPKRPLKRRSANLSAFSKRRQAKPTSTKADSFLARERENA
ALAAGEAVEGNSETSPPPLPKDPNQTPPAHTDSFLGTGEEPSAVGKGAPCDRDPDSCKIW
TPFVNHLGNPRIHSIMKHDAIMEASSPDYVLVEAEANRVAQDALRALKVSRQRYRGVAST
WADGASTRFKSRFGQKRNPNLMISSSSSNQASGKKCKLKQEQLIVNEGERERGDPAGSRL
APFDGEASSSALDSSSLLAKMRERNHLTGSQQRADPAEGSFQHRIPGAPTAPTEHDELLS
DIRSFMAFQAQLPGQASTREILQEFGSKLTTQQSCVFRELLRSLCTFHRQSGGEGLWKLK
AEFT
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgaatatcatatgggggaccacggggaggggcgggccttggagaacaaagca
ccgtcggcagaggcttctttggggcccctccgaaaaggcccctcgctgctaatcgaccgg
cagcagattcggtcggtggcccccaaggaccaagcgcttgaactcagaggcctgctggga
gtcgaggtctacgaccaagaggtcttggagcatggagtccttcagcagatagacaaggcg
atcggtgaagccgctgaagggcgtccacttcatgatgctcctgaaacaggcgaccaagct
gaattggaaggtgtgggaccaagtgcatcctctccaaaaccatctgctacaaaccatacg
gagcaaattggacctcaggctaaggaggacatcggtagaaaactggattctgcaaaagaa
caaaactgcaacaaagagcaagagtttaaaaaaatgaaaacgaaacaaaagcaccttcaa
aacgctggggaagaggaagatcctgaagacgggacggcgggagaccacgaagcgaaggaa
tccagggatgggcttggaggccattttgctcccggtccttcgtccctcggaaggatgctt
atgtcagcgcaggaagagaccgaatgggagaagctcatccgaactggccagatgactccc
tttgggacgaaaatgcttccgaaagaagagaggaagccccggcggatcatgctgaacgaa
acgtcgggttttgaaaagcttttggcagatcaggagaagctcctgtcccagaggaagaaa
accccctttcgtaagggggcccagcagaaagcgcggggtagccaggccaaatccccagcc
tctctcaccaaaggcaggaggagcaaaggcccaccagaggctgctggccctctgcggcgg
cagcaggaggaggaacaggctgtctgccttcaggccaaagccaagcttccccaggccggg
gaatcagagaagagggagcagcaggaggagtgggaggcctctggatgcagggggtctcgt
gaagacctcagcctttcagaggaggaggaggagggtctgggtgtgaatcgtcccgtgtcc
tgggaagacccattgaagcaagaagaccactcggatgatgatttcttcccgagttcttcc
gaagaagacgaaggcaaagaaggagagggccttactaggaggcggagaataaagagatac
aaggacgatggcaatgaagattactataagcaaaggttaaggaggtggcacagacagcag
ctgagggaccggaaagggcagcgtcagagcacggccgaagagtctgacgaaagcgatgcg
gaatttcttgagggttttaaagttccaggttacctcttcaagaaactgtacaagtaccag
cagacaggtgtgaggtggctgtgggagctgcactgccagcaggtaggaggcatcctgggg
gacgagatgggcctgggcaagaccatccagataattgtcttcttggcaggcctgagttac
agccagatcaggactcgcggcacaaattacaggcacagagggctgggccccaccgtgatc
gtctgtcccaccaccgtcatgcatcagtgggtgaaggagttccacgcctggtggccgccc
ttcagagtggcagttctgcacgagacgggctcctacgcggacaaaaaggtaaaactgatt
cgtgaaattgtggcctgcaatggaatcttgataacctcctattcttacattcgcttgttg
caagagaacctccagaggcataactggcattacgtgattctggacgagggacataaaatt
cggaatccgaaggctgcagttacactggcttgcaaacagttctccactcctcatcggatc
atcttgtccgggtcacctctgcaaaaccacctcaaggagctgtggtctctctttgatttt
gtgtttccagggaagttggggaccctccctgtcttcctggagcagttctcggtccccata
accatggggggatattccaacgcctctccggtccaggtgaaaaccgcgtacaagtgtgcc
tgtattttacgggatacgattaacccctacctgctgcgcagaatgaaggccgatgttcag
atgagcctctccttgccagataaaaatgaacaggtcttattttgtcgcttgacggctgaa
cagcaagaactctacaaaaagtttattgattccaaagaagtctatcagatcctcaacaga
gaaatgcagatcttcccagggctgatagccctaagaaaaatgtgcaaccaccctgacatc
ttctccggcggaccgaaggttctgaaggggacccccgaggaggacctcaaggaagaagac
cagttcggcttctggaggcgttctgggaagctgatagtcgtggagtccctgctgaaaatc
tggcacaagcagagccaccgggtgctgctcttcacccagtccaggcagatgctgcacatc
cttgaagagtttttaaagcagaggaactactcctacctcaaaatggacggcaccaccaca
gtggcctcgaggcagcctctgattgggaggttcaatgaggatgcgtccatctttgtcttc
ctcctcactactcgcgttggtgggcttgggattaacctgacgggcgcagaccgggtgatc
atctacgaccctgactggaatcccagcacagacactcaggctcgggagcgcgcgtggagg
atcggccagaccagggacgtgaccgtgtaccggctcctcaccgcagggaccattgaggag
aagatttaccacaggcaaatattcaaacagttcctgacgaacagaatcctgaaggacccc
aagcagaggcgcttcttcaaatccaacgacctctacgagctcttcaccctcagcactccg
gacggagcccaggggaccgaaaccagcgccatcttcgcaggaaccggttctgatgtccca
gcaccaaagcggccgttgaaacgtcgcagtgccaacctttctgcattttccaagaggcgc
caagcgaagccgacctccaccaaggccgattccttcctagcaagggagcgtgagaatgca
gccctcgcagcaggggaggcagtcgaggggaactcggaaacatcccctcctccccttcca
aaagaccccaaccaaactccccccgcccatacggattccttcctggggaccggagaggag
ccttcagcggtggggaagggggccccgtgtgacagagatccagattcctgcaagatctgg
accccttttgtaaatcatttgggaaatccaaggatacacagcataatgaagcatgacgcc
ataatggaagcttctagtccagattatgtgctggtggaagcagaggccaatcgtgtggct
caagacgccctccgagccctgaaggtttctcgacaacgataccgtggagttgcttctact
tgggctgacggcgcctccactcggttcaaaagcagatttggccagaagaggaacccaaat
ctcatgatatcctcatcgtcttccaatcaggcttcagggaaaaagtgcaagttgaaacag
gaacagctgatagtgaacgagggtgagagggagagaggagaccctgccggcagcagactc
gctcccttcgatggagaggcctcttcgagcgctctggactcctcttcgttgctggccaaa
atgagggaaaggaaccacctgactggatcccagcagagggcggatccggctgaggggagc
ttccagcacaggatccccggggcccccacggcccccacagagcacgatgagctgctctcg
gatatccggagcttcatggctttccaggcccagctgccgggccaggccagcacgcgcgaa
atcctgcaggaatttggctccaagctgaccacgcagcagtcctgcgtcttccgggagctc
ctgagaagcctctgcactttccaccggcagtcggggggcgaagggctttggaagctcaag
gcggaattcacctga
DBGET
integrated database retrieval system
