Thamnophis sirtalis (common garter snake): 106541359
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Entry
106541359 CDS
T06107
Symbol
GLTSCR1
Name
(RefSeq) glioma tumor suppressor candidate region gene 1 protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106541359 (GLTSCR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106541359 (GLTSCR1)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
106541359 (GLTSCR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
106541359
NCBI-ProteinID:
XP_013912251
UniProt:
A0A6I9XDG2
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MDDEDGRCLLDVICDPQALNDFLHGSEKIDSDDLLDNTGDAASAFFESAGLHVQETSGNH
LNAEQSQPTTSVDLDFLEDDILGSPSGGGANLQNSDQPCDILQQSLQEANITEQTLEAEA
ELDLGSFQLPTLQPVVHTASDGTPQIFSSGADLIGLQQPAVLTHQALVQQSVGADVVNKA
ISVQPFLQQVGLGNVTIQPISNLQGLPNGSPSGALGIGQIQVVGQQVMAINQPAQQIIAK
QVQPSQVATMPVGSYITQTAAEQQQVTLASAGVSPQNASLVIQKNHPAVSTTTLNGSSMF
GSVSAAQGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFGPN
NTTLTLQNEAALQQQKAQQNLTFMAGKAGQNVVLSGFPPGLPANMFKQPPPQQQTLNKPM
SVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLTGTSTVQIPQQLSALQANMGGQILT
TSHPSGQTHIITSQGPGGQLINQALPAQILTNQNLASQLNLGQVLASQNAHGTAHILSAP
IQLQPGQVGQPTLFQMPVSLAGSLTTQSQPTAAINHSGQTVIQGVTLPNQVAMLNATESL
NQTVTIQAPPNAASQSPGLIQPQSASSSNLLPSDQANMLTVQSTSQPSAPSQLQLNVQQQ
TPPPPQQQAQIPATSQSSPNLVASSPEKIILGQTAAGTVISQDSMQMFLQQKDQSQQQQQ
QQQQQFYSTALKMQQESSMNDSAVTPHLPMPLPIYSLATTALSTTSSVPASVIVSSSVGT
ALQPPASRELNQSHNLPPVDSKVPQFSTGPSQQALACQLPSGQQKLPGASPSHSLPHPSM
GESPQLQPTHLSQIQSPHQSRPPSQPQPLSRPPSRPHSRPPSQPQTLSRPPSEPLSRSCT
PQTQMQNLYVIQNQIASSPHGSNQHPLRPPSQPQVPFQAPQAQPEGQPQLATPPHLSLQV
QLAPQLQPQSEAQARLQPQIQASSEVQHTHSPHFQLQFPAQGPIKPPTPTQTLHLTSEQQ
RNFQMVSNQFQALSTIPVPVPQQKQLMDRFQQVPQGIILQTKQSTSTSQAPPTLSQFSNQ
SSSVLVSSQGQQLTMTTIPAQAPAVHGHTPVPTTIQSSSTGSSKAAPVLEKGQVPRGTTS
GGGGQQPAQCTAVLQQQTPVLVKSASVSIAAAVPTENKTFSSSSTIISGGKATSGQGKAT
IPHAVQQSVQAKPGVISSTSGLNLGKGQLPLQVVGKGLSQVMSSAPAQIQQQYDSKLGSL
KKAPPMLQPSKEACFLEQLHKHQGAVLHPDYKTSFRSFEDAFQRLLPYHVYQGTLPSPHD
YRKDEEFEMVSTQLLKRTQTMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTTLALD
KQLAKEKPDEYVSSSSRSQSFASSSSSVAQGSLPSHVPLTSENLKSPPVQMPTHINPTKL
VIKHSGGSPSVTWAKASPSLDGDDDALPSRSRPPIKTYEARSRIGLKLKIKQEAGLSKVV
HNTALDPVHQTPPPVCTVIKTADQHSSTSSVSTTAATTATATASTAGQMNGTVDHIGAAP
MEKKPMATYCRLPLRKTYRENVDAFVAEKAPDASLKGSVSKSDTVPSTLIIKQDGGSRSV
ITSHKSQESPSGAVAEKSRSEENTKHTFFNRSDARSLVMQGSPAPPKTDDSTSGLMKELA
EVEDEFYQRMIKTEPLDHGPASELAWEVPLPPAKRRKSESFDVDNASFSSDSPPDDSLNE
HLQSAIDSILNLQQPQAGSQTTRTPSSSYNSSSSPFSSPVHRTDTYLAPNHNGGLGTRTL
NR
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggacgatgcttgctagatgtaatttgtgatcctcaggccttgaat
gattttttacatggatctgaaaagattgacagcgatgatctcttggacaacacgggagat
gcagccagtgccttctttgagagtgctgggctgcatgtgcaggaaacctctggtaatcat
ttgaatgctgagcaaagccagcccacaacaagtgttgatttagacttcttggaagatgac
attctgggctcgccttcaggaggtggagccaacctgcagaattcagatcaaccatgtgat
atcctccaacagagtttgcaggaggcaaacatcaccgaacagactctggaagcagaggca
gaactcgatctgggttcttttcagctccctacgctccaaccagtggtgcacactgcctcg
gatggtaccccgcagattttttccagtggggctgacctcattggattacagcaacccgct
gtcctaactcatcaagcactggtgcagcagtctgttggggctgacgtggtcaacaaagcc
atcagcgtgcagccttttcttcaacaagttggcttaggaaatgtcaccatccagccgatt
tctaatcttcaagggttgcccaatggcagcccgagtggggcactgggcatcgggcagatt
caagttgttggccagcaagtcatggcaattaaccagcctgctcaacagatcattgctaag
caagttcagccttcccaagtggccactatgcccgtaggaagttacatcactcagacagcc
gcagaacaacagcaggtcaccctggcctccgctggcgtatccccgcagaatgccagcctt
gtcatccagaagaaccacccagcagtgtccactaccactctgaatggaagctcgatgttt
ggaagcgtatcggctgctcagggttcccaaccactcacggtcacgtcgaacttgagcagc
ccacttgttcaagcccaaaatgtcatcattcaccggacacccacgccgattcaacccaaa
cctgcaggtgtccttcagcagaagctgtaccagattacccccaaaccctttggccccaac
aacaccacgctgaccctccaaaacgaggctgctctccagcaacagaaagctcagcagaac
ttaactttcatggcaggcaaagcgggacagaatgtggtgctttctggcttcccaccgggg
ctgcctgccaacatgttcaagcagccaccgccacagcaacaaactctgaataagccaatg
agtgttcatctgcttaatcaaggcagcagcattgttatccccgcacagcatgtccctcag
gccatgctacagggtcaaaaccagttcctcctcccaggccagctcaccggaacatcgact
gttcagatccctcagcagctctcagcgttacaggctaacatgggtggtcagattctgacg
acgtcacatcctagtgggcaaactcacatcatcaccagccaaggcccaggtgggcagcta
ataaatcaagcactgcctgcccaaattctcaccaatcagaacctggcaagccagctgaat
ttgggacaagtactcgcctcgcagaatgcccacggaacagctcacattctttctgccccc
atccagttgcagccaggccaggtgggccaaccaactctcttccagatgcctgtctctctg
gctggtagcctaacaactcagagccagcccactgctgccatcaatcacagcggtcagact
gttatccaaggagtcaccctgcctaaccaagtggctatgttaaatgctacggagagcctc
aaccaaactgtgaccatacaagcaccccctaatgccgccagccagagccctggtcttatt
cagccacagtcagcttccagcagcaacctgctacccagtgaccaagccaatatgctaact
gtccagtccacctctcagccctctgctccttctcagcttcagctgaacgttcagcagcaa
acgccaccaccacctcagcaacaagcacaaatacccgcgacttcccagtccagccctaat
ttggtggcatcaagtcctgaaaagattattttgggccagacagctgctggaactgtaatc
tcccaggattcgatgcagatgttcctacagcagaaggatcagagccagcagcagcagcag
cagcagcagcagcaattttattcaacagctctgaaaatgcagcaggagagcagtatgaat
gactctgccgttactccccatctgccaatgcctctgcccatctacagcctagccaccact
gcactcagcaccacaagcagtgtcccagcctcggtgatagtcagcagcagtgtaggcaca
gccttgcagccgcctgccagccgagagctgaaccagagccacaacctgccaccggtggat
tccaaagtaccacagttctcaaccggcccttcccagcaggcactggcttgccagttgcct
tcagggcagcagaaacttcctggagcctccccttcccactcactacctcatccttcaatg
ggggaaagcccccagctccagcccacgcacctttcccagatccagtctccacaccagtcc
cgtcctccgtcccagcctcagcccctttcccggccaccttcccggcctcactcaagaccc
ccttcccagccccagactttatccaggccgccttctgaacccctgtcgcggtcttgcacc
ccacaaactcagatgcagaacttatatgtgatccagaatcagattgcttcctctcctcat
ggttccaaccagcatcccctacggcctccctcgcagcctcaggtaccgtttcaagcccct
caagcccagccagagggacagcctcagctagcaacccctccacatctgtcattacaagtg
cagcttgctcctcaactccagccccagtctgaggctcaggcacggttgcaaccccagatc
caggcctcttctgaagtgcagcatactcattccccccatttccagttacagttccctgcc
caaggccctatcaaaccacccaccccaacccagacccttcacctgacatccgaacaacag
aggaactttcagatggtgtccaatcagttccaggctctctcaacaatcccagttcctgtt
cctcagcagaaacagctaatggatcggtttcagcaggttccccagggaattatcctgcaa
acaaaacagtcaacgtccactagccaggccccacccaccctgagccaatttagcaaccag
tcctcttcagtgttggttagcagccaaggacagcagctcacaatgacaacaattccggct
caggcaccagcagttcatggccatacgcctgttcccacaaccattcagtcttccagtaca
ggttccagcaaagcagctcctgtacttgaaaaggggcaagtgccaaggggaacaacaagc
ggaggaggaggtcaacaacctgcacagtgtacagcggttcttcagcagcaaactcccgtg
ttggtcaaatcagcatcagtatcaattgctgctgcagttcctaccgagaataaaacattt
tccagcagctccaccattatttctggagggaaagcaacttcggggcaaggaaaggccaca
attcctcatgctgtacaacagtcagttcaggcgaagcctggagtcattagctccacatca
ggcctgaatcttgggaaagggcagctgccactccaggtagttggaaaaggcttgtcacaa
gtcatgtcttcagcaccagctcaaatccagcagcagtatgacagcaagctgggaagcctg
aagaaagcacccccgatgctacaaccgagcaaggaagcttgcttcttggaacagctacat
aaacaccaaggagccgttttgcatcctgattacaaaacttcatttcggtcatttgaagat
gcttttcagaggctcctaccttaccatgtctatcagggaacactgccttctccccatgac
tatcggaaagatgaagaatttgaaatggtgtccacgcagctgttgaaacgtacacaaacc
atgctgaacaaatatcggttactcctcttggaagagtcccggagagtcagtccttcggca
gagatggtgatgattgacaggatgttcatacaagaagaaaaaactaccttagctctcgat
aaacagctagcaaaggagaagccagacgagtatgtctcctcatcttcccgctcacagagt
tttgcttcttcttcttcttctgtggctcaagggtctctgcccagccatgttcctttgacc
tccgagaacttgaaatcgcctccggtacagatgccaactcatatcaaccccaccaaattg
gttatcaagcacagcggagggtctccatctgtaacgtgggctaaagcgtctccctcgttg
gatggcgacgatgatgccctgccctccaggagcaggccgcccattaaaacctacgaagcc
cggagccggattgggctgaagctaaagatcaaacaagaagccggacttagcaaagtggtt
cataacactgcactggatcctgttcaccagacaccgccacccgtgtgcacggtgatcaaa
acggctgaccagcactcgtccacgtcatccgttagcaccactgcagctacaacggcgacc
gccacagcctcaacggcgggacaaatgaacgggaccgttgaccatatcggtgcagctcca
atggagaaaaaacccatggcgacctactgcaggcttcctctgcgtaaaacgtaccgggag
aacgtggatgcttttgtagccgagaaggctcccgatgcctctctcaaagggagtgtttca
aaatctgatacggtgccaagtactcttatcatcaagcaggacggggggtcccgaagtgtt
atcacatcccacaaatctcaggagagtccttccggcgcggtggccgagaagagcaggtcg
gaggaaaacaccaaacacacttttttcaaccgtagcgacgcccgctctttggtgatgcaa
ggaagccctgcccctcctaagaccgacgattcaaccagtggccttatgaaggaattggca
gaggtggaagatgagttttaccaacgcatgataaagactgagccacttgaccacgggccg
gcctccgaactcgcgtgggaggtgcccttgcccccagccaaaagaagaaagtcggaatct
tttgatgtggacaatgccagcttctccagcgacagcccccccgatgactcgctaaacgag
catctacagagcgccattgacagcatcctgaatttgcagcaacctcaggccgggagccag
actacgcgaacgccctcctcttcctacaattcgtcctcttcccctttctcctcacccgtc
caccgcacggacacgtaccttgcccccaatcacaacggtggccttggaaccaggacgtta
aacagataa
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