Thamnophis sirtalis (common garter snake): 106541363
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Entry
106541363 CDS
T06107
Symbol
NFATC1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04010
MAPK signaling pathway
tsr04020
Calcium signaling pathway
tsr04148
Efferocytosis
tsr04218
Cellular senescence
tsr04310
Wnt signaling pathway
tsr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106541363 (NFATC1)
04310 Wnt signaling pathway
106541363 (NFATC1)
04020 Calcium signaling pathway
106541363 (NFATC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106541363 (NFATC1)
09143 Cell growth and death
04218 Cellular senescence
106541363 (NFATC1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
106541363 (NFATC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106541363 (NFATC1)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
106541363 (NFATC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
106541363
NCBI-ProteinID:
XP_013912261
UniProt:
A0A6I9XDH4
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MSGLEEDPEFDFDFLFEFNQSSEAAGGKEHYNYASSNINSTLPLNVAHSSLPTPCHGLQT
SIPVIPNVSSANHLSGYGGHADNSTAGYYLPPSVRPNGVPALESPRIEITTYLGLHQNNN
QFFHEAEVDESTQNTKRSPSTATLNLPNIEAYRDPSCLSPASSLSSRSCNSEASSYESNY
SYPYTSPQTSPWQSPCVSPKTNETEERYQRSLVPCTLLNSPRHSPSTSPRTSITEENWLS
SRNSRPSSPCNKRKYSLNGRQTSYSPHHSPTPSPQNSPRVSVTDETWLGNTNQYTSSAIV
AAINALTTDSTIDMNDGIPIKSRKTAVDHTPSMALKTEPSGDDQGTISPITDLSPEEFPG
FQHIRKGSFCDQYLSVPQYPYQWAKSKPLSPTSYMSPSLPALDWQLPSHSGPYELRIEVQ
PKSHHRAHYETEGSRGAVKASAGGHPVVQALILNTAPSTACSQHSPVHRKEGRASIMGSK
STEISRFVEPQKCSSHANSSRS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctggaggaagatcccgagtttgacttcgatttccttttcgagtttaaccag
agcagcgaggctgccggcggcaaagaacattataactatgcatcttcaaatataaattca
actttgcctctaaatgtggcacattcttcactgccaactccatgtcacgggcttcaaacg
tctattccagtcattccaaatgtctcatcagctaatcatctttcaggttatggagggcat
gctgacaatagcactgctggatattatttgcctccaagtgtcagacctaatggagtgcca
gcattagaaagtcctagaattgaaataaccacctacttgggacttcatcaaaacaacaac
cagttcttccatgaagctgaggttgatgaatccacccaaaacaccaagagatcgccttct
actgctactttgaatttaccaaatattgaggcttacagggacccatcttgtctgagccca
gccagtagcctgtcttccagaagttgcaattcagaagcgtcctcctatgaatcaaattat
tcctatccttatacttcaccccagacatctccttggcaatcgccatgcgtatcacccaag
accaatgaaactgaggagaggtatcagcgaagtttagttccctgcacgctccttaattca
ccccgacattctccttccacatctcccagaacaagtattactgaagaaaactggctgagc
tctcgcaactccagaccatcctctccctgtaataagagaaaatacagtttgaatggcaga
cagacatcctactctccacatcactccccaaccccttctccccagaattctccaagggtt
agtgtgactgatgagacatggttgggaaacactaaccaatataccagttcagccattgtc
gccgcaattaatgccctcactactgacagcacaatagatatgaatgatggaattcctatc
aagtctaggaaaactgcagtagatcatactccctccatggcactcaagactgaacctagt
ggagatgatcaggggaccatatcaccgattactgatttatcaccagaagagtttcctggg
ttccagcacatcaggaaaggaagtttctgtgatcagtatctttcagttccccagtatccc
tatcagtgggccaaatcaaagcctttgtcgccaacatcatacatgagcccatctctgcct
gccttggattggcagttgccatctcactcaggaccttatgaacttcggattgaagtgcag
ccgaagtcccatcaccgagcccattatgagacggaaggcagtcgaggagctgtcaaggcg
tctgctgggggacatccagtggtgcaggctcttattcttaatacggcaccttcaaccgca
tgttcacaacactctcctgtacacagaaaggaagggagagcaagtattatgggtagcaaa
agtactgaaatctccagatttgtggagccacaaaagtgttcttctcatgccaatagctct
aggtcttga
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