Thamnophis sirtalis (common garter snake): 106541697
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Entry
106541697 CDS
T06107
Symbol
APP
Name
(RefSeq) amyloid beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106541697 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsr00535
]
106541697 (APP)
00536 Glycosaminoglycan binding proteins [BR:
tsr00536
]
106541697 (APP)
Peptidases and inhibitors [BR:
tsr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
106541697 (APP)
Proteoglycans [BR:
tsr00535
]
Cell surface proteoglycans
Others
106541697 (APP)
Glycosaminoglycan binding proteins [BR:
tsr00536
]
Heparan sulfate / Heparin
Others
106541697 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
106541697
NCBI-ProteinID:
XP_013912685
UniProt:
A0A6I9Y4Z2
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MLPHLAFLLLGASWTAGALEVPTDGNAGLLAEPQVAMFCGKSNMHMNVQNGKWESDPSGT
KSCIATKEGILQYCQQVYPDMQITNVVEANQPVTIQNWCKQGRKQCRSHPYIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDICETHLHWHTVAKESCSEKGMNLHDYGMLLPCGIDKF
RGVEFVCCLVADESDNIDSAEAEEDDSDVWWGGADADYADGSYDKVAEEQLTEGDTTDVE
DENTDDDDDEDGDEAEEVTEDQYQEATERTTSIATTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDNEEYCMAVCGSVIPTTAASTPDAVDKYL
EAPGDENEHSHFQKAKERLEAKHRERMSQVMREWEEAEHQAKNLPKADKKAVIQHFQEKV
ESLEQEAANERQQLVETHMARVEAMLNDRRRVALENYITALQAVPPKPRHVFNMLKKYVR
AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVTYERMNQSLSVLYNVPAVAEEIQ
DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTVERLPVDGEFSLDDLKP
WHPFAVDPVPANTENEVEPVDARPAADRGLTTRPGSGLTNVKTEETSELKMDAEYRHDSG
YEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVFTLVMLKKKQYTSIHHGVVEVDA
AVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcatttagctttcctgctgctgggagcctcttggacagcgggagctttggag
gtgcctactgatggaaatgctggcctgttggcagaacctcaagtagccatgttttgtggc
aaatcgaatatgcatatgaatgttcaaaatggaaaatgggaatctgatccttctggaact
aagagctgcattgcgacaaaagaagggattttacagtattgccagcaagtttatcctgac
atgcaaatcacaaatgttgttgaagctaatcaaccagtaacaatccagaactggtgcaag
cagggaaggaagcagtgtaggagtcatccatatattgttgttccatataggtgcttggtt
ggagaatttgtgagtgatgcccttttagtgccagataagtgcaagttccttcaccaggaa
aggatggatatttgtgaaactcacctgcattggcatacagttgctaaggagtcctgcagt
gaaaagggaatgaatctgcacgactatggcatgctcttgccctgtggaattgacaaattc
cgtggtgtggagtttgtttgctgcctagtagcagatgaaagtgacaatattgattcagct
gaggccgaggaagatgattctgacgtttggtggggaggtgcagatgcagactatgcagat
ggcagttatgacaaagtagcagaagagcagcttacagaaggggatactacagatgtagaa
gatgaaaatactgatgatgatgatgacgaagatggtgatgaagctgaagaagttacagaa
gatcaataccaggaagccactgaaagaacaaccagcattgctactaccactaccactact
gagtctgtggaagaggttgttcgagaagtgtgctctgaacaagctgagactggtccttgc
cgagcaatgatctcccgctggtactttgatgtgactgaaggaaaatgtgccccattcttt
tacggcggatgtggtggaaaccgaaacaactttgacaatgaggaatactgcatggcagtc
tgtggcagtgtcatacctaccacagctgccagcactccggatgctgttgacaagtaccta
gaagcacctggcgatgagaatgaacattcccatttccaaaaagcaaaagagagattagaa
gcgaagcatcgtgaaagaatgtctcaggtcatgagggaatgggaagaggcagaacatcaa
gcaaaaaatttgccaaaggctgataaaaaggctgtcattcagcatttccaagagaaggtg
gaatccttggaacaagaagctgcaaatgagagacagcagctagtagagactcacatggcc
cgagttgaagccatgctcaatgaccgtcgccgtgttgccttggaaaactatattacagct
ctacaggcagtgccccctaagcctcgacatgtattcaatatgctgaagaaatatgtgcgt
gcagagcagaaagacagacaacatacactgaaacattttgaacatgtgcgtatggtggac
cctaagaaagcagcacagatcagatctcaggttatgacacatctacgtgtgacatatgaa
cgtatgaaccagtctctttctgttctttacaatgtgccggcagttgctgaagagattcag
gatgaagttgatgaattacttcagaaagagcaaaactactctgatgatgtcttggctaat
atgatcagtgaacccaggatcagctatggaaatgatgccctcatgccttcattgacagag
actaaaacagttgaacgtctcccagtagatggagaattcagcctagatgatcttaagcct
tggcatcccttcgcagttgatccagtcccagcaaatactgaaaatgaagttgagccagtt
gatgcccgtccagctgcagacagaggactcaccacacgaccaggctctggattaaccaat
gttaagacagaagaaacttcagaattaaagatggatgcagaatacagacatgattcagga
tatgaagtacatcatcagaaactggtattctttgctgaagatgtaggttcaaataaaggt
gccatcattggactaatggtagggggtgtcgtcattgccacagtcattgttttcacttta
gtgatgctaaagaagaaacagtatacatctattcatcatggtgtagtggaggtggatgct
gcagtgacaccagaggaacgtcacctttctaagatgcaacaaaacggctacgaaaaccca
acctacaagttctttgagcaaatgcagaactag
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