Thamnophis sirtalis (common garter snake): 106541698
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Entry
106541698 CDS
T06107
Symbol
GABPA
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106541698 (GABPA)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
106541698 (GABPA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
106541698
NCBI-ProteinID:
XP_013912687
UniProt:
A0A6I9XFN5
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MTKREAEELIEIEIDGTEKQECTEESIVEQTYTTAEFVSQAIDINEPVGNLKKLLEPRLQ
CSLEAHEICLQDIQLDPDRSLFDQGVKTDGTVQLSVQVISRQGMDPKLNILEIVKPVETV
EVVIDPDAHHTETEAHLVEETQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERL
GIPYDPVQWSTDQVLHWVVWVMKEFSMTDIDLNTLSIPGRELCSLSQEDFFQRVPRGEIL
WSHLELLRKYVLASQEHSGEIATVTIDQPVQIIPASVQSSTPTTIKVINSSTKAAKVQRA
PRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQK
WGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVT
ECEQKKLAKMQLHGITQPVTAVALATASLQTEKEN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaagagaagcagaagaactaatagaaatagaaattgatggaactgaaaaacaa
gagtgcactgaagaaagcattgttgaacagacttacactactgcagaatttgtaagtcag
gctattgatatcaatgaaccagttggaaacttaaagaaactactagaaccaagacttcaa
tgttccttagaagcccatgaaatctgtctccaagatatacagctggatccagaccgtagt
ctgtttgatcaaggtgtcaaaacagatggaactgtgcagcttagtgtccaagtaatatcg
aggcaaggaatggacccaaagttaaacatccttgaaattgtaaaacctgtcgaaacagtt
gaggtagtaattgatccagatgcccatcacactgaaactgaagcacatcttgttgaagaa
actcaagtaataacattagatggaactaaacatattactaccatatctgatgaaacatca
gaacaagtaactcgatgggctgcagcattggaagggtaccgtaaagaacaagaacgctta
ggaataccctatgatccagtacaatggtcaactgatcaggtactgcattgggttgtatgg
gtgatgaaggaatttagcatgacagacattgacctcaatacactcagcattccgggaaga
gaactgtgtagcctcagccaagaagatttcttccaaagagtccctcggggagaaatccta
tggagccatctggaacttcttcgaaaatatgtactagccagccaggaacactctggagaa
atagcaacagttactattgatcaacctgtgcagattattccagcttcagttcagtcttct
actccaaccaccattaaagtaattaatagtagtacaaaggcagcaaaagtacaaagagct
ccaaggatttcaggggaagatagaagttcacctggtaacagaacaggaaacaatggtcag
atccagttatggcaattcttgcttgagcttctgactgataaagatgcccgagattgcatt
tcatgggttggtgacgaaggagagtttaaactaaatcaaccagaactagttgcccaaaag
tggggacaacgtaaaaataagcctacaatgaattatgaaaaactcagtcgtgctttacgg
tattactacgatggtgacatgatctgcaaagtacaaggcaaaaggtttgtatacaagttt
gtatgtgacttgaagactctcattgggtacagtgcagctgaactgaatcggttggtgaca
gaatgtgaacaaaagaaactggcaaagatgcaactgcatgggattacacaaccggtcaca
gcagttgcattggctacagcatctctgcaaacagaaaaagagaactga
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