Thamnophis sirtalis (common garter snake): 106541860
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Entry
106541860 CDS
T06107
Symbol
RBBP5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
KO
K14961
COMPASS component SWD1
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106541860 (RBBP5)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
106541860 (RBBP5)
COMPASS/SET1 complex (yeast)
106541860 (RBBP5)
MLL-HCF complex
106541860 (RBBP5)
MLL3/MLL4 complex
106541860 (RBBP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR11_1st
WDR54
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
CxxCxxCC
Motif
Other DBs
NCBI-GeneID:
106541860
NCBI-ProteinID:
XP_013912881
UniProt:
A0A6I9XFC8
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSAS
TDNMVSQWDVLTGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVL
PVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIE
FARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEY
IVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQ
VENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTDDGCLHLLTASCQQYDWRPA
AIRKPCEASELGSMLSKCADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEV
EDPEENPYGPPPDAVQTALPDDGIGSEKKRPSLSDGPQPPKKKPKTTNIELQGVPNDEVH
PLLGVKGDGKSKKKQAGRPKGSKGKEKDSPFKPKLYKGDRGSLPLEGAAKGKVQAELGQP
LPGGGISELL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctcttacatgtacttttaacagatggggcactcttctagcagtgggttgtaatgat
ggccgaattgtcatttgggatttcttgacaaggggcattgcaaaaataataagtgcccat
attcacccagtttgttcattatgttggagtcgagatggtcacaagttagtgagtgcatca
actgataatatggtgtctcagtgggatgttttgactggtgattgtgatcagaggtttcgt
tttccttctcctattctgaaagtccagtatcatcctcgtgatcaaaacaaggtgttagta
tgtccgatgaaatctgccccagtaatgctaacattgtctgattcaaagcatgttgtccta
ccagtagatgatgattctgatctcaatgtggtagcttcttttgatcgacgaggggaatat
atctacacagggaatgctaaaggaaagatcttggtgttaaagacagacacccaggatctt
gttgcttccttcagagtgacaacaggaaccagcaacactactgctattaaatctatagaa
tttgctcgaaaaggaagttgcttcctcataaatactgctgatcgcataatcagagtttat
gatggccgggaaatcttgacttgtggtagagatggggaaccagaaccaatgcaaaaacta
caggatttggtgaacaggacaccttggaagaaatgctgtttctctggtgatggagagtat
attgttgcagggtcagcccgtcagcatgctctgtacatatgggagaaaagtattggcaat
cttgtgaaaatcctgcatggcaccaggggagagctgttgctggatgtggcatggcatcct
gtccgaccaatcattgcttctatttccagtggagtggtatctatatgggcacagaatcaa
gtggaaaactggagtgcctttgcacctgattttaaagagctggatgaaaatgtagaatat
gaagaacgggagtctgaatttgacatagaagatgaagataaaagtgagccagaacagaca
gatgatggttgtcttcacctgctgacagccagttgccagcagtatgactggaggccagct
gccataagaaagccatgtgaagcttcagaactggggtccatgctaagtaaatgtgctgat
gctgcagaagatgaggaagtggatgtaactagtgtagaccctattgcagctttttgtagc
agtgatgaagaactggaagactctaaagctttactctacttgcctattgctcctgaggtg
gaagacccagaggaaaatccatatggacctccaccagatgcagttcagactgctttaccc
gatgatgggataggctctgagaagaagcggccatctttgtccgatggacctcaacctcca
aagaagaaacctaaaaccaccaacatagaactgcagggagtacctaatgatgaagtccat
ccactgctgggtgtaaaaggagatggtaaatccaagaagaagcaagcagggagacctaaa
ggatcaaaaggtaaagagaaagattctccatttaaaccgaaactctacaaaggggacaga
ggttctttacctctggaaggagcagcgaagggtaaagtgcaggcggagctgggacagcct
ttgccaggtggtggaatctcggagttgttatga
DBGET
integrated database retrieval system
