Thamnophis sirtalis (common garter snake): 106541872
Help
Entry
106541872 CDS
T06107
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106541872 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106541872 (TRIP12)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106541872 (TRIP12)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
HECT type E3
106541872 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
Maestro_HEAT
Motif
Other DBs
NCBI-GeneID:
106541872
NCBI-ProteinID:
XP_013912902
UniProt:
A0A6I9XGA1
LinkDB
All DBs
Position
Unknown
AA seq
1554 aa
AA seq
DB search
INLLHYIFEGKGQYKSIKTFFYYLQITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVV
DAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRN
ALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLL
QQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPMLAVQLMKQNIAETLHF
LLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDG
AIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTA
RAIQRKPNPLANTSTTGHAESKKDDARAQLMKEDPDLAKSFIKILFGVLYEVYSSSAGPA
VRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKL
PDIFSVYFRREGVMHQVKNLAESEALLTSPPKACTNGSGTLSATTTVSTGTATTASNAAS
DLGSPSLQHTREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDEDKVDNQAKSPTA
TQSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARVASKDTISNNREKIKSWI
KEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQADGGVECLVEIRSIVSESDV
SSFEIQHSGFMKQLLLYLTSKGEKDAVSRDVRLKRFLHVFFSSPLPGEEPLGRLEPLENA
PLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDCAN
VKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSG
NVRHRLQFYIGDHLLPYNMTVYQAVRQFSLQAEEERESTDDESNPLGRAGIWTKTHTIWY
KPVREDEDSNKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGLCPSVSNPLEVYLISSA
PESITFEDPSLDVVILLRVLHAMSRYWYYLYDNASCKEIIPTSEFINSKLTAKANRQLQD
PLVIMTGNIPTWLTELGKSCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQ
DSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALV
SQELQRADLGLWRGEEVTLANPKGSQEGTKYVHNIQGLFALPFGRTAKPAHIAKVKMKFR
FLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFNIDPVVAKSVYHLEEIVRQ
KRRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNL
EEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKTDTWDAKT
LMECCRPDHGYTHDSRAVKFLFEILSSFDSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTI
VRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAKEGQQSFHLS
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
ataaacttgctgcattacatttttgaaggaaagggacaatataaatcaataaagactttt
ttctattatttacagataactttgctacagatggagcacaacttcgacattatgaatcat
gcttgtcgagccttaacctatatgatggaagcacttcccagatcatctgcagttgtggtg
gatgcaattcctgtttttttggagaagcttcaagttattcagtgtattgatgtggcagag
caagcattgactgccttggagatgttatcacgtagacacagtaaagctattttgcaggca
ggaggcttagcagactgtttgctgtacctggagtttttcagcataaatgctcagaggaat
gcattagctattgctgccaattgctgccagagcatcactcctgatgagtttcactttgtt
gcagattctcttccactgcttacccaaaggctaacccaccaggataaaaagtcagtagaa
agcacttgcctttgctttgcacgtttggtggacaacttccaacatgaagagaatttgctg
cagcaggttgcttctaaggatttgcttacaaacattcaacaactcctagtagtgactcct
ccaatattaagctcagggatgttcatcatggtggtgcgcatgttttctttaatgtgttcc
aactgtcctatgctagcagttcagcttatgaagcaaaatattgcagaaactcttcacttt
ctcctttgtggagcctcaaatgggagttgtcaggaacaaattgatcttgttccaagaagt
cctcaagaactgtatgaacttacttcacttatctgtgaattgatgccatgcttacctaaa
gaaggaatttttgctgttgacactatgctaaagaaaggaaatgcgcaaaacacagatggt
gcaatatggcagtggcgagatgacaggggtctctggcatccctataacagaattgatagc
cggataattgaggcagctcatcaggttggtgaagatgaaataagtctgtctacattgggg
cgtgtttatacaattgactttaattctatgcagcagatcaatgaggatactggaacagca
cgtgccattcagagaaaacccaatcctctagccaataccagtactaccggacatgcagaa
tcaaagaaggatgatgctcgagcacagctaatgaaagaagatccagatctagctaaatct
tttattaaaatcttatttggtgttctctatgaagtatatagttcttcagccggacctgct
gttagacacaagtgccttagagcaattcttagaataatttattttgctgatgctgaactt
ctgaaggatgtactgaaaaatcatgctgtgtcaagtcatattgcctctatgctgtcaagt
caagatcttaagatagtcgttggagcccttcagatggcagaaattttaatgcaaaaatta
cctgacatttttagtgtttacttcaggagagaaggagttatgcaccaggtgaagaattta
gcagaatcagaggctttactgacaagtccccccaaggcttgcactaatggctcaggaaca
cttagtgctactacaacagtaagcactggaacagccactactgctagcaatgctgcttca
gacttaggttctccaagcttacagcataccagggaagactctttggacctgagtccacag
ggccgactaagtgatgttttgaagagaaaaagattgccaaaacgtggaccccgaaggcca
aaatattcacctcccagagatgaggacaaagtagacaatcaagcaaaaagccctactgct
acgcaatctcccaaatcttccttcttggcaagtttgaatcctaaaacgtggggaagatta
agcacacagtcgaacagcaacaacattgaaccagcacgtacagctggtgtgagtggtctg
gcaagagttgcttcaaaagatacaatatccaacaacagagagaaaattaagagttggatt
aaagagcaagctcacaaatttgtggaacgttattttagttcggaaaatatggatggaagt
aaccctgcactaaatgtgttacagagactttgcactgcaactgaacaactcaaccttcag
gcggatggtggagttgagtgccttgtagaaattcgtagtatagtctctgaatctgatgtc
tcttcgtttgagatccagcacagtgggtttatgaagcagctgctgctttacttgacgtca
aagggtgaaaaagatgctgtaagcagagatgtcagattgaaaaggttccttcatgtgttt
ttctcttctcctcttcctggagaagaaccccttggaagattagaacctttagaaaatgca
cctttgttagcattggtccataaaatgaataattgtcttagtcagatggagcaatttcca
gttaaagtccatgactttccaagtggaaatggaacgggcagcagaggatcacaagcttta
aaatttttcaacacacatcagttgaaatgccagctgcaaagacacccagattgtgctaat
gtgaaacagtggaaaggaggacctgtgaagatagatcctcttgcgttggtacaagcaatt
gaaagataccttgtagttagaggttatggcagagtgagagaagatgatgaagatagtgat
gacgatggctcagatgaggaaatagatgaatctctggctgctcagttcctaaattcaggg
aatgtgaggcaccggcttcaattctatattggggatcatctcctgccatacaacatgaca
gtttatcaagcagttagacaatttagtttgcaagccgaagaagagagggagtctacagat
gatgaaagcaacccattgggaagagctggcatatggaccaaaactcataccatttggtac
aagccagtacgagaagatgaagatagtaataaagattgtgttggtggtaaaagaggaaga
gcacaaactgctcctacgaaaacatctcccagaaatgcaaaaaaacatgatgaattgtgg
catgatggtctatgtccttctgtctcaaatcctttggaagtttatctcatatcttccgct
cctgaaagtataacttttgaagatccttcattagatgttgttattcttttaagagtttta
catgccatgagtcgttattggtattatctatatgataatgcaagctgtaaagaaattatt
ccaacatctgaatttatcaacagtaagctaacagcaaaagctaacagacagcttcaagat
cctttggtaataatgacaggaaacataccaacatggctgacagagcttggaaaatcatgt
ccttttttctttccatttgacacccggcaaatgctgttttatgtaactgcatttgatcgt
gatcgagccatgcagagactgctggacactaatccagaaatcaatcaatctgattctcag
gatagcagagtagcaccccggctggatcggaaaaagcgcacagtgaatagagaggaattg
ttaaaacaagcagaatcggtgatgcaagatctgggcagttcaagagctatgttggaaatc
cagtatgaaaatgaagttggcacaggtttaggccccacactggagttttatgcacttgta
tctcaggaattacaaagagcagacttgggcctgtggagaggtgaagaagttactcttgcc
aatcctaaaggaagccaagaagggaccaaatatgttcataatattcaaggtctgtttgca
cttccatttggcagaactgctaagcctgcccatattgctaaagttaaaatgaagttccgc
tttctggggaaattaatggcaaaagcaatcatggattttagactggttgaccttccactt
ggccttcccttttacaaatggatgctgcggcaggaaacatctctaacatctcatgacttg
ttcaatattgaccctgtagtagccaaatctgtgtatcatcttgaagaaattgtgagacag
aagagaagacttgaacaagacaaatcacagaccaaagaaagtctacaatatgcactggag
acccttacaatgaatggctgttcagttgaagatctaggattggatttcacattgccaggg
tttccaaatatagaactgaaaaaaggagggaaagacatacctgtaactattcataattta
gaagaatatctcagacttgttattttctgggcactaaatgaaggtgtttctagacaattt
gactcattcagagatggatttgaatctgtctttccccttagtcatcttcagtacttctat
cccgaggagctggaccagttgctgtgtggtagcaaaacagacacttgggatgcaaagaca
ctaatggaatgttgcaggccagatcatggatatacacatgacagtcgtgctgtgaaattc
ctgtttgaaattcttagtagttttgatagtgaacaacagagattatttcttcagtttgtg
actggtagccctagactgccagtaggaggctttcgaagtttgaatcctccccttacgatt
gtacggaagacatttgaatccacagaaaatccagatgacttcttaccctccgtaatgacc
tgtgtaaactatctcaagttgccagactattcaagtattgagataatgcgtgaaaaactt
ttgatagctgcaaaagaagggcagcagtcattccacctttcctga
DBGET
integrated database retrieval system
