Thamnophis sirtalis (common garter snake): 106541926
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Entry
106541926 CDS
T06107
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106541926 (SH3TC1)
Membrane trafficking [BR:
tsr04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
106541926 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
SH3_1
ARM_TT21
TPR_1
SH3_2
TPR_10
Thiaminase-1_dom
Csd3_N
Motif
Other DBs
NCBI-GeneID:
106541926
NCBI-ProteinID:
XP_013912981
UniProt:
A0A6I9XFN6
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MAPERCPPHTPPSRAPEETVCTNGPLCGFLGPCLETLLLDDSLWLSSPEEAAGIEALLDE
TCLHRLYRGLLMEEGAYSGFSPENIDARNPRAICQVESAAPEQVPDGHPPDGLEPPVPFH
QWFLKANAASDGLAGITALPVTDQAATGLSVAVVSHESSVPDEISFQKGDEIEIIGYFVS
CMPWFVGRRLSSGRVGFVQSRCVEPEGFLAIATELPCTDFFREDGDSSTKEESLLDDLAR
LLAPTSQGTICSAYQIDAQNDVGPQKPREEEMPPSFFNEEESPTPCRALRSLMKMKDFQL
TEDKKQQLPTCHGPEPPLLQKPRFSLRQDGTLGPEIPDSLLSFLNQGGFVEGLGGLYDPP
LSFLKTSIQGDATEEELMDSLARARAVARQADLPWATTRLCYLLGRMSLQKSKLSQARVY
LEEALATLRGDFHDLHLVVTLYTHLTGIYLKQKNAEKSASFLDKAASLLMGVASHTDSAE
MALEILNYALKRAVLSRSRNAEARACFLLAKHCLTFKQGQEPAPFLERLQQLLNMGQGLP
SGGGSVDCYLKLGQLYSQKCLPRLALSCAKVVSSRSSCSLLELFRTLDLVLRNASKVHSP
TPGGQTHPSLMAFYLRELLHALEGSRGSQKLRGIIYCGLSQLHSRYKRYEEAIGYMEAAL
ELNPTGEVEEDTINHFIFLSWLYILHRQSDTALCILKAVAESPWSTRQQLGVIHNMAAIS
LRRRNQLREAAESYFRALGISRETGSVANEAVALANLGLLYLHSAAQSLGEHFLIKAIQL
FSELSSRECGGNFVAILLRLGHHYARGAQKEKGRNCYEWAFLVAMECEDVEGQLQAVQHL
CHFHSTVVPDPAQCVLYNEYQLTLLRKMSDKVTEGQVLETISQLYLSLGTERACRSALDY
LKRSLGIFIDLQAKNKEAQAWLQAGRIYYALRENELVDVYIQVAHNAALSSRDPNLEMEM
LEASGDIFFNGDWEKEKAAPFYRDKALPLAVKAKNSSAELRLFNKLVGLFLTLRKYEECL
GYAQASLMLSVDLGDQLSERVAYHRLAVIHHHLGQCELAEHFFLKAVSLCPSPLEFDEEA
LYYVKVYLLLGDITFYDLKDPFDAAGYYNLALAAAMDLGNKKAQLKIYTRLAIIYHNFLV
DREMSLFFYQKARVFATELNICRINLSPDQPPGRKFP
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcacccgaaaggtgtcccccccacacccctcccagccgagctccagaggaaactgtc
tgtacaaatgggccactctgtggttttttaggtccctgcctggagaccctcttgctggat
gactccctgtggctctcctcgccagaagaagctgctggaatcgaggccctcttggacgag
acctgcctccaccggctctacaggggactcttgatggaagaaggtgcctattcggggttt
tctcccgagaacattgacgcgaggaatcccagagccatttgccaggtggaatcggcagct
ccagagcaagtcccggacggccacccccccgatggcttggagcccccggtgcctttccat
cagtggtttctgaaagcaaatgccgcgtctgatgggttggccggcataactgcgcttcca
gtcacagaccaagcggccacaggattatctgtcgccgtcgtcagccacgagagctctgtg
ccagacgagatcagtttccaaaaaggagatgagattgagatcattggctacttcgtgagc
tgcatgccgtggtttgtggggaggcgtctctcttcaggccgggttggctttgtgcagagc
cgctgtgtggagcccgagggcttcctggccatcgccacagaacttccgtgcacggacttc
ttcagggaagatggcgactcttccacgaaagaagaatccctcttggatgatctggccagg
ctcctggcgcccacttcccaggggaccatctgcagcgcctatcaaatcgatgcacagaat
gacgtgggcccccagaaacctcgggaggaagaaatgcccccttccttcttcaatgaagag
gagagcccaacgccatgcagagcgctgaggtcactcatgaagatgaaggacttccaactg
actgaagataagaagcagcagctgcccacttgccatgggccggagcccccccttttgcag
aagccacgtttctccctgcgccaggatgggactttggggccagaaatccctgattcgtta
ctgtcgtttttgaaccaggggggttttgtggagggcttggggggcctgtacgaccctcct
ttgtcctttctcaagacgtccatccagggcgatgccacggaggaagagctgatggattcc
ttggctcgcgctcgggcagtggccagacaagccgacctgccctgggccacgacacggctc
tgctacctgctgggaaggatgagtctccagaagtccaagctgtcccaggcccgggtgtat
ttggaagaagccctggcaaccctccggggggatttccacgacctccacttggtagtcact
ctttacacccacctcacaggcatttacctgaaacagaagaacgcggagaaaagcgcttcc
ttcctcgacaaagccgcctctttgctgatgggcgtggccagccacacggacagtgcagag
atggccctggagatcttgaactatgccttgaaaagagccgtgctcagccggagcagaaac
gccgaggccagggcctgcttcctgctggcaaagcactgcctgaccttcaagcagggacag
gaaccggcccccttcctggaaaggctgcagcagctgctgaatatgggccaggggttgccc
agtggcggggggtccgtggactgttacctgaaacttggccaactctacagccagaagtgc
ctgccccgccttgcgctcagctgcgccaaggtggtctcttcccgcagctcctgttctctg
ctggagctgttcaggaccctcgatttggtgttaaggaatgcctctaaagtccacagtccc
acgcctggtggacaaacacacccctccctcatggccttttacctccgagaactgcttcac
gcgctggaagggagcaggggcagccagaagctgcgtggcatcatttactgcggactttct
cagctgcacagccgttacaagcggtatgaagaagccatcggctacatggaggcggctcta
gagctgaacccgactggagaagtggaggaagacaccattaaccacttcattttcctcagc
tggctctacatcctccatcggcagagtgacacggcgctgtgcattttaaaggcggtcgca
gagtccccctggagcacccgccagcagttgggcgtcatccataacatggcagccattagt
ctgagacggaggaatcagctcagggaagccgcggagagctacttcagagctctgggcatt
tccagagagacgggcagcgtggctaacgaggccgtggctctggccaacctgggcctcctg
tacctgcactcggctgcccaaagcctgggggagcatttcttgatcaaagccatccagctc
ttctccgaactctccagcagagaatgtggggggaacttcgtggccatcctcctccggctg
ggccaccactacgcccggggggcccagaaggagaaggggaggaattgctacgagtgggcc
tttctggtggccatggaatgcgaggatgtggaagggcaactccaggcggtccagcacctc
tgccatttccacagcacggttgtcccagatccagcgcagtgtgtcctctacaacgaatat
cagctcaccctgcttaggaagatgtccgacaaggtcacggaagggcaggtgctggagacc
atcagccagctctacctgtctctggggacagaaagggcctgccggtctgccctggactac
ctgaagagaagccttggcatcttcattgaccttcaagccaaaaataaggaagcccaggcc
tggctccaggcaggcaggatctactacgcactgcgggagaacgaattagttgacgtttac
atccaggttgctcacaacgctgctttgagctctcgggaccccaatttagaaatggaaatg
ctcgaagcctcgggagacattttcttcaacggagactgggagaaggaaaaagcagccccc
ttctacagggacaaggccctgccgctcgctgtgaaggccaaaaacagcagtgctgaactt
cgcctcttcaacaagttggttgggctgttcttgaccttacggaagtatgaggaatgcctc
ggatacgcccaggcgtcactaatgctcagtgtggatttaggagaccagctaagtgagcga
gtggcctaccaccgcctggcggtcatccaccatcacttggggcagtgtgagctggctgag
cacttcttcctcaaagccgtttccctctgcccctccccgctggagtttgatgaggaagcc
ctctattacgtcaaagtgtaccttctcctgggagacatcaccttctacgacctgaaggat
ccttttgatgctgcaggatattacaacctggcgctggctgctgccatggacttggggaac
aagaaagcacaactgaagatttacaccagacttgccataatttaccacaatttccttgtc
gaccgagagatgtctctcttcttctaccagaaagccagagtctttgccacggagctgaat
atttgcagaatcaacctctctccagaccagcctcctgggagaaagttcccatga
DBGET
integrated database retrieval system
