Thamnophis sirtalis (common garter snake): 106541952
Help
Entry
106541952 CDS
T06107
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106541952 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106541952 (USP4)
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106541952 (USP4)
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106541952 (USP4)
Ubiquitin system [BR:
tsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106541952 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Choline_bind_3
Motif
Other DBs
NCBI-GeneID:
106541952
NCBI-ProteinID:
XP_013913017
UniProt:
A0A6I9XGM7
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MAASGLKLVDWYGCMEGQKPIVRKVVEYGLFVKHCKVEVYLLELKLCQNSDPTNLVDSYF
SKADTIATIEKEMRKQFNIPDGTEVRLWNKCTSNAYEQLSKLDSTVQDAGLYQGQVVLIE
MKNEDGSWPRQSSLTKSCTAPSRNLATSSKTPTSSCSSVSASSVITNGDSNNSYGLNCSS
LGKGGSSFSYSYNSRESLQSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEA
EINQDNPLGMRGEIAEAYAELIKQMWSGRNSHVAPRMFKTQVGRFAPQFSGYQQQDSQEL
LAFLLDGLHEDLNRVKKKPYLELKDANGRPDSVVAKEAWENHRLRNDSIIVDIFHGLFKS
TLVCPKCSKISVTFDPFCYLTLPLPLKKDRSMEVFLVFADPQRKAMQFRIVVPMMGGISD
LCDALSKISGIPAENMVVTEVYNHRFQKIFQMDEGLTHIMPKDNIFVYEVCKATEDSAEC
VTLSVYFREKKARQSSATPGTVLYGQPLLIAVPKHKLTIEYLYNVILERIGRYVKIDLKE
EYSDVCLDNDTCNGFTNISEGDAEEMEHQDSEENKQKIPDADASRSEERDGQVEGKQHQK
KQLFSFSFVNSYGTSEVNCLTTEGKILKLSSYATVAIDWDSDTRKLLFDEHEAQAFEKHN
SMFQSQKKKTSVALRECIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVH
LKRFSYNRYWRDKLDTVVDFPIRDLNMSEFVCDPAASPYVYDLIAVSNHYGGLGVGHYTA
YAKNKINGKWYYFDDSNVSPASEEQIVTKAAYVLFYQRRDVKLKGSHSFCPSMEPESEEC
DGMDTN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccggccttaaactagtagattggtatggttgtatggaaggacagaagcca
attgtgagaaaagttgtggagtatggattgtttgttaagcactgtaaagtagaggtttat
cttttggagttgaagttgtgtcagaacagtgatcctacaaatcttgtggactcttatttc
agcaaagcagatacgattgctactattgaaaaggaaatgcgaaagcagtttaatattcct
gatggtactgaagtcagactgtggaacaaatgtacaagtaatgcttatgaacaattaagc
aaactcgatagcaccgtacaagatgcaggactctatcagggacaggtagtgttgatagaa
atgaaaaatgaagatggttcctggcctagacaatcttctctgacaaaatcatgtactgca
cctagcagaaatctagctacctcttcaaaaacaccaacaagctcttgctcttcagtatct
gcctcttcagtcattacaaatggtgatagcaataactcctatggtttgaactgttccagc
cttggtaaagggggctcgagcttttcttacagttacaacagcagagaaagtcttcagtca
cagcctggactctgtgggctcagtaatctaggaaatacatgtttcatgaactcagctcta
cagtgtttgagtaacacacctcccttgactgactatttcttggaagataaatatgaagct
gaaataaaccaagataatcctctgggaatgaggggagaaattgcagaagcatatgcagaa
ctcatcaaacaaatgtggtctggccggaattctcatgtagcccctcgtatgttcaaaact
caggttggccgttttgctcctcagttttcaggataccaacaacaagattctcaggagctt
ctggcatttcttttggatggcttacatgaggatttaaacagagtaaagaagaaaccttat
ttggagttgaaggatgctaatgggagacctgattcggtagttgcaaaagaagcctgggag
aaccatcgattgcgtaatgactctataattgtagatatatttcacggactcttcaaatcc
accttggtctgccccaaatgttccaaaatttcagtaacttttgatccgttttgctattta
acactccctttgcccttgaagaaagatagatccatggaggtgttcttggtgtttgcagat
ccacagcgtaaagctatgcaattccgaatagtagtgcccatgatgggtggtatatctgat
ctgtgtgatgcactgtccaaaatttctgggatccctgcagaaaatatggtggtgacagag
gtctataatcacagattccagaaaattttccaaatggatgaaggtttaactcatattatg
ccaaaggacaatatatttgtatatgaagtttgtaaagcaactgaagatagtgctgaatgt
gtcacactctcggtttacttcagagaaaagaaagcaagacaatctagtgctaccccaggg
acagttctttacggccaaccgctactcatagctgtacccaaacacaagctcacaatagag
tatttatacaatgttatattggagcgaattggacgctatgtaaaaattgatttaaaagaa
gaatattctgatgtttgtctggacaatgacacttgcaatggcttcaccaatatatctgaa
ggtgatgctgaagagatggagcatcaggatagtgaagaaaacaaacagaaaataccagat
gcagatgcttctcggtctgaagagagggatgggcaggtggaagggaagcagcaccagaaa
aagcagttgttcagtttcagttttgtgaattcttacgggacatcagaagtaaactgcctt
accacagaagggaagatcctcaaactgagttcctatgcaactgttgctattgattgggat
tccgacacccggaagctgctttttgatgaacatgaagctcaggcatttgaaaaacacaac
agtatgtttcagtcacaaaaaaagaaaacttctgtagcccttagagaatgtatagaactt
tttacaactatggagacacttggggaacatgatccctggtattgtcctaattgcaagaaa
catcagcaagccactaagaaatttgatctttggtcattgccacgcattttggtagtgcat
ttaaaacgcttttcatacaatcgatattggagagataaacttgacacagtagttgacttc
cctatcagggatttgaacatgtctgagtttgtttgtgatccagcagcaagcccatatgta
tatgacttaattgctgtttccaatcactatggaggcttgggtgtagggcactatactgca
tatgctaagaataaaatcaatgggaaatggtactactttgatgatagcaatgtatctcca
gcttctgaagaacaaatagtgacaaaggcagcatacgtactgttttaccaacgcagagat
gtcaagctcaaggggagccattctttttgcccaagcatggaaccagaatctgaagaatgt
gatggcatggatactaactga
DBGET
integrated database retrieval system
