Thamnophis sirtalis (common garter snake): 106541990
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Entry
106541990 CDS
T06107
Symbol
TULP4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106541990 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Other domain-containing proteins
Tubby family proteins
106541990 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
SOCS_box
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
106541990
NCBI-ProteinID:
XP_013913063
UniProt:
A0A6I9XQV5
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MYAAVEHGPVLFSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRKDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPAVYPVLVQNTKQLLTVSFTSGDISLMNNYDDLSPTTIRSGLKDVVAQWCTQGDLLA
VAGMEKLSQLAELNAASFLKSALVKFYNIHGEHIYTLETPVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQTIASSLRDDKDISKLTLPPRLCSYLTTAFTPTIKPPI
PDPNNMRDFVSYPTSGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKADEVYGNSLISTMIDSCNCSDSSDIELSDDWAGKKSPKITRASKSP
KLPRINIEARKSPKLSRAAQEISRSPRLPIRKPSIGSPSLTRREFPLEDIIQHSYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISTDYINLPVFNP
NVFSEDEDDLPVTGASGVPENNPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLANQTTAVATADHVADNAVHYPIPSRYSNPGQVIFGGVEMGRILQVPPQLPLPPQNA
IQMAIVDHRDGDRDHEHLQKAKALRPIPQVAEGDTAVFSTAQEIQLNKINPPPPYPGTIP
AAPTTAPPPPPPPPVPPQPPVDLCLKKGDFSLYSAAHYQTPLGYERITTFDSSGNVEEVC
RPRTRMVCAQNTYTLPGPGSSATLRITSSEKKIQQPCTSATLNRLTVPRYSIPTGDPPPY
PEIAAQLAQGRSITQRLDNSIIHATLRRNSREAALKMAQLVDSQRATLQFPLKLKSNVVG
AQYQQRVPTALYTCSQCSSNTNNGISNTNNGNGNISNINASSGTSGLSTMRPDVTTGSSS
QHNSVIAHSASTSPLASQSSYNLLNPLDNSRERTDYVNSAFMEDEALSQHCPVEKSARHI
PVAMAEPNIAVKRPPPYQWEPMVSEEIWVPQERTAHSTLPNPGKSNPLVIGQAQHLDISR
ATFVSPKSPTSPTATFQMSYGVGAPYLGNYSIPPPPLPPLQGMQVPCSPKEALASSQMVQ
QEPSVVLQPAYPSNLSYCPLPPMYPGNSTCSSLQLPPMALHPWNSYSTCPPSVQNTQNIL
PPKALLVVDKSIMSPPPVEPTGHVGSDVMAETADNFQEVLSLTESPISQRTDKFGKKNRK
RLDSRADEGNMQAITEGKVKKEARTTLTDFNSLIASPRLGREKKKLKSQKDQLKSKKMNK
MNEFQDSSESEPELFISGDELMNQSQGSKKGWKTKRNLRTASELDEFKCRKANEKEDGRL
GNQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYI
LDFQYPFSAVQAFAVALANVTQRLK
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcagtggaacatgggcctgttctcttcagcgattccaacatcctctgcctc
tcatggaaaggcagggttccaaaaagtgaaaaggagaaacctgtatgccggaggcgatat
tacgaggaaggctggttggccacaggaaatggcaggggagtagtgggtgttaccttcact
tccagccactgtagaaaggacagaaacacaccccagcgaatcaacttcaatttaagaggc
cacaacagtgaggtggttctcgtgcgatggaacgaacccttccagaagctggcaacttgt
gatgctgatggtggaatatttgtttggattcagtatgaaggcagatggtccgtggagctt
gtgaacgatcgtggagcacaggtgagcgattttacatggagccatgatggaacacaagca
cttatatcatacagagatggatttgtactggttggatcagtcagtggacaaagacattgg
tcttcagagattaatctggagagccagatcacctgtggcatatggacacctgatgatcaa
caggtcttatttggtactgctgatggtcaggttattgttatggattgccatggccgaatg
ctggcacatgttcttcttcatgagtccgatggcatccttagtatgtcctggaattaccca
agttttttggtggaagacagtagcgagagtgacacagattcagatgattattccccacca
caagatggtccagcggtatatccagtcctagttcagaacaccaaacagcttctcactgtc
agcttcacatcaggagatattagcttaatgaacaactatgatgacttatctcctaccacc
atccgctcagggttaaaagatgtagtggctcagtggtgcacacaaggagacttgctggct
gtagcaggcatggaaaaactaagccaactggctgaacttaacgctgcttcttttctgaaa
agtgcactcgtcaagttttacaatattcatggagaacacatctacacgttggagacccct
gtacagcgccccataatctcaatttgctggggtcatagggactcacgtctgctcatggct
tctgggcctgccctgtatgttgtccgcgtagagcaccgagtgtccagcttacagctcctg
tgccaacaaacaattgccagctctttgagggacgacaaagatatcagtaaattaaccctg
cctcctcggctttgttcatacctaaccactgcctttacaccaaccataaagcctcctatc
ccagaccctaacaacatgcgagattttgttagttacccaacatctggcaatgaaaggctt
cactgtacaatgaagcggacagaagatgatccagaagttggaggtccttgctatacattg
tatttagaatatttgggtggtctggtgcctatattgaaaggtcgtcgaattagtaaactc
aggcctgagtttgtcatcatggaccctaagacagatggaaaagcagatgaagtctatgga
aacagcttgatttccactatgattgacagctgcaactgctctgattccagtgatattgaa
ctgagtgatgactgggctgggaaaaaatctcccaaaatcactcgtgctagtaaatcaccc
aaacttcccagaattaatatagaagctcgcaaatctccaaagttatcacgagctgctcag
gagatatcacgatctcccagattgccaataaggaagccctcgataggatcacctagctta
actcgtagagaatttcctttggaagacatcattcagcacagttatcttgctcaggtcaca
tcaaatatctggggaaccaaatttaaaatagtaggcttggctgcgttcctaccaaccaat
ctcggcgcagtcatctataaaaccagcctgttgcatcttcagccaaggcaaatgaccatt
tatctcccagaagtgcggaagatttctactgattatatcaacctacctgttttcaatccc
aatgtttttagtgaagatgaagatgatttgccagtgactggagcatcaggagttcctgag
aataatccaccttgcaccgtaaacatcccaattgctcctattcatagttcagcacaagca
atgtcaccaactcagagcatagggttggtgcagtctttgctagctaatcaaaatgtgcaa
ctggatgtcctcgcaaatcagacaacagctgtggcaacagcagaccacgtggctgataat
gcagtccattatccaatcccaagcagatactctaaccctggccaagtgatctttggagga
gtagaaatgggacgtatcctccaggtccctcctcagttacccttgccaccccagaatgcc
atccagatggcaattgtggaccacagagatggggacagagaccacgaacacctccaaaaa
gctaaggctctgcgccccatcccccaggtggctgaaggagacacagctgtcttcagcact
gcccaagaaattcaactgaacaaaataaaccctccccctccataccctggaaccatacct
gcggctcctaccacagcgcctccaccaccgccacctcctccagtacctccacaacctccg
gtagatctctgtttgaaaaaaggtgatttctcactctactcagcagcccattaccagacc
cctcttggctatgagagaatcaccactttcgacagcagtgggaatgtcgaggaggtgtgc
cgccctcgaacacggatggtgtgtgcccagaatacgtacactctgcccgggccaggcagt
tctgccactttacggattacttcatcagagaagaagattcagcagccatgcactagcgcc
accttgaacaggctcacagttccgcgttactccattccaacaggggatccacccccttat
ccagagattgcagcccagctagctcaaggccggagcatcacacagaggttggacaatagc
atcatccatgctacactgcggagaaatagcagggaagcagccctgaaaatggctcagttg
gtggacagccagagagccacgttgcagttcccactgaaactgaagagcaatgttgtggga
gctcagtaccagcagcgagtgccaactgccctgtacacatgcagccagtgcagcagtaac
acgaacaatggcatcagcaacacaaacaatggaaatgggaacatcagtaatatcaacgca
agcagcggcacatcaggcctcagcactatgagacctgatgtaaccacagggagcagctct
cagcacaattcagtcattgcacactcagccagtacatcgcctttggcctcccaatcctct
tacaatttactcaacccacttgacaattctcgggagcggaccgattacgtaaactctgcc
ttcatggaggatgaggctctttctcagcactgccctgtggagaaatcagcacgccacatc
cctgtagccatggcagaacctaacatcgctgtaaaaaggccacctccctatcagtgggaa
cctatggtgagcgaggagatatgggttcctcaagaaaggacagctcatagtactttgccc
aatcctggtaaatccaaccctctagtcattggccaagctcaacatttggatatatcccga
gcaacctttgtttctcccaaatctccaaccagtcccactgccactttccagatgagttat
ggtgttggagcaccatatttgggaaattatagtatccctcctcctccacttcctcctctt
caaggaatgcaggtcccctgttctcccaaagaagctctggcctcatcccaaatggtacaa
caggaaccatctgttgttcttcagccagcctatccttcaaacctctcctattgccctttg
cctcccatgtatcctggaaatagtacttgttcaagtttacagctgccaccaatggccttg
catccatggaattcctatagcacatgcccaccttctgtccagaatacccagaacattctg
ccacccaaggcgcttcttgtggtggacaaatctattatgtctccaccaccagtagagcct
acgggtcatgtgggctctgatgtgatggcagagacagcagataacttccaagaagtgctc
tccttgaccgaaagtcccatttctcagaggacagacaagtttggaaagaagaatcgcaag
cgcctggatagccgggcggatgaaggaaatatgcaggctatcacagagggaaaagtcaaa
aaggaggccaggaccacattgactgacttcaattccctaatagccagcccaagactgggc
agggagaagaagaagctcaagagtcagaaagatcagctgaagtcaaaaaagatgaacaag
atgaacgaatttcaggacagctcagaaagtgagcccgaattgtttattagcggggatgaa
ctgatgaatcagagccaagggagtaaaaaggggtggaaaactaaaaggaacttgaggaca
gccagtgaactggatgaatttaaatgtcggaaagcaaatgagaaggaagatgggcggctg
ggaaaccagggctttgtctatgtgatggcgaataaacagcctttgtggaatgaggcaacc
caggtctatcagctggactttggagggagggtgactcaagaatccgcaaagaatttccag
attgagctggaaggaagacaggtcatgcagtttggacggattgatggcaatgcctatatc
ttggactttcaatatccattttcagcagtgcaggcctttgcagtagctttggctaatgtg
actcagcgcctgaaatga
DBGET
integrated database retrieval system
