Thamnophis sirtalis (common garter snake): 106542078
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Entry
106542078 CDS
T06107
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03015
mRNA surveillance pathway
tsr04261
Adrenergic signaling in cardiomyocytes
tsr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106542078
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
106542078
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
106542078
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsr01009
]
106542078
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106542078
03036 Chromosome and associated proteins [BR:
tsr03036
]
106542078
Protein phosphatases and associated proteins [BR:
tsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
106542078
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
106542078
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
106542078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Y_phosphatase2
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
106542078
NCBI-ProteinID:
XP_013913171
UniProt:
A0A6I9XG94
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MAGVAGGGGGSVAGSGGSGNDFQWCFSQVKGAIDEDVAEADIISTVEFSYSGDLLATGDK
GGRVVIFQREPENKSRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAA
HFLLSTNDKTIKLWKISERDKRAEGYNLKDEDGRLRDPFRITALRVPILKPMDLMVEASP
RRIFANAHTYHINSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEV
ITAAEFHPHHCNVFVYSSSKGTIRLCDMRSSALCDRHSKFFEEPEDPSSRSFFSEIISSI
SDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFEC
CWNGSDSAIMTGSYNNFFRMFDRNTRRDLTLEASRESSKPRAILKPRKVCTGGKRKKDEI
SVDSLDFNKKILHTAWHPAENIIAVAATNNLYIFQDKIN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggtggccggcggcggcggaggaagcgtcgccggcagcggcggcagcggcaac
gatttccagtggtgcttctcgcaggtgaagggggcgatcgacgaggacgtggcggaagct
gatattatctcaacggttgaatttagttactctggagatcttctggcaacaggagacaaa
ggtggcagagtggttatatttcaaagggaaccagagaataaaagccgtcctcattcgagg
ggagaatataatgtttacagtacctttcagagtcatgaacctgagtttgactacttgaaa
agtctagaaattgaggaaaaaattaataaaattaggtggttgccacaacagaatgctgct
cacttcttattatctacaaatgataaaactattaaattatggaaaatcagtgaaagggat
aaaagagctgaaggttataacttgaaagatgaagatggacgacttcgggatccatttaga
atcacagcgctacgggtgccaatattgaaacccatggatctcatggtagaagcaagtccc
cgaaggatatttgcaaatgcacacacatatcacataaactctatttcagtcaatagtgat
catgaaacatacctttctgcagatgacctaagaatcaacctgtggcatttagaaatcaca
gatagaagttttaatatcgtagacataaagcctgctaatatggaggaattaacagaggtg
ataactgcagcagaatttcatcctcatcattgcaacgtgtttgtctacagcagtagcaaa
ggaactattcggctctgtgacatgcgttcttctgccctttgtgataggcattcaaaattc
tttgaggagcctgaagatcccagcagcagatcattcttttcagaaataatatcttcaata
tctgatgtaaaattcagtcacagtggtcgatacatgatgacccgagactacctctcagtt
aaagtgtgggatctaaatatggaaaacaggccagtagagacctatcaggttcatgaatat
ctccggagcaaactctgttcgctgtatgagaatgactgcatctttgacaaatttgaatgc
tgctggaatggttcggatagtgccattatgactggctcctataacaacttctttcggatg
tttgatcggaatacgcggagagatcttacgctagaggcctccagagaaagtagcaaacct
cgagcgatcttaaagccccggaaagtctgtacggggggcaaaagaaagaaagatgaaata
agtgttgacagcctggacttcaataagaagatcctccacacagcctggcacccagcggag
aacatcattgctgtagctgcaaccaataacttgtatatattccaagacaaaattaattaa
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