Thamnophis sirtalis (common garter snake): 106542120
Help
Entry
106542120 CDS
T06107
Symbol
BNIP1
Name
(RefSeq) vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106542120 (BNIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106542120 (BNIP1)
Membrane trafficking [BR:
tsr04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
106542120 (BNIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
DUF2777
Anti-RecBCD_p2
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
106542120
NCBI-ProteinID:
XP_013913242
UniProt:
A0A6I9XH98
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MSAAGDVPVRVCNQEIVKFDLEIKAAVQDIRDCTGPVSALAELNAKVKEKFQHVRLRIQE
LEQMAKEQDKESEKQVLLQEVENHKKQMLSNQTAWRKANLACKIAIDNSEKDELLRGGDP
LRQRKSTKESLAEGASNITESLMGISRMMSQQVQQSEETMQSLVSSSRTILDANEEFKSM
SGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggccggtgacgtgccggtccgggtttgcaatcaggagattgtcaaattcgac
ctggagattaaagctgccgtacaggatatccgggattgtacaggacctgtaagtgcgctt
gcagaattgaatgccaaagtaaaagaaaaattccagcatgtacgactcagaatacaagaa
cttgaacagatggctaaggagcaagataaagaatcagaaaaacaagtattactccaagaa
gtagagaaccataaaaagcaaatgctcagcaatcagactgcctggcgtaaggcaaaccta
gcttgcaaaattgcaattgacaattctgagaaagatgaattgctgcgaggaggagatcct
ttacgacaaagaaagtctactaaggaaagtctggcagagggggcaagtaacatcacagag
agcctgatgggaattagcagaatgatgtctcagcaggttcagcagagtgaggaaaccatg
caatctctagttagttcttcgcgaactatcttggatgccaatgaggagtttaagtccatg
tctggaacaattcagctggggcgaaagcttattacaaagtataaccgcagagagctgact
gataaattgctcatctttcttgcccttgccttgtttttggctactgtgctttacatcttg
aagaaaagactatttccatttttgtga
DBGET
integrated database retrieval system
