Thamnophis sirtalis (common garter snake): 106542153
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Entry
106542153 CDS
T06107
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106542153 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106542153 (EXOSC8)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106542153 (EXOSC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
106542153
NCBI-ProteinID:
XP_013913279
UniProt:
A0A6I9Y5M7
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MTATVTDAFRTVEPLEYYRRFLKENCRPDGRDLGEFRTTTINIGSITTADGSALLKLGNT
TVMCGIKAEFAAPTVESSNKGYIIPNVDLPPLCSSRFRPGPPCEEAQAASQFIADIIENS
QMITKEDLCILDGKIVWVLYCDIICLDYDGNILDACMCAFLAALKNVLLPVVAINAETGL
VEVNLKEKNPLTIKKHPVATSFVLFDTLVVVDPTAEEEDLASGTLTIVTIEDNKLCSVHK
PGGSTISEAKLQDCISRAKARHKEVQKLMDKIIKNV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaccgtaacggacgcgttcagaactgtagaacctttggaatattacagaaga
ttcttaaaagaaaattgtcggcctgatggaagggaccttggtgaatttaggaccacaact
atcaacataggttcaattacaactgcagatggctctgcacttttgaagttagggaatact
acagtgatgtgcggcataaaagcagaatttgcagcacccactgttgagtccagtaacaag
ggatatatcattcccaatgtagatcttcctccactttgttcatcaagatttcgacctgga
cctccatgtgaagaggctcaggctgctagtcaatttattgctgatatcattgaaaattca
cagatgataacgaaagaagatctatgcattttagatggaaagattgtatgggttctatat
tgtgacattatatgcttggactatgatggaaatattctcgacgcctgcatgtgtgctttc
ttagcagctctgaaaaatgtgcttttgcctgttgttgcaataaatgcagaaactggtttg
gtggaagttaatttgaaagagaagaatcctttgactattaaaaagcacccagtggcaaca
tcatttgtgttgtttgacacactagtggtagttgacccaactgcagaagaagaagacttg
gcatctgggactttaactattgtgactatcgaagacaacaaactgtgttctgttcataaa
ccaggtggaagcacaatatcagaagcaaagcttcaagactgtatcagtcgggcaaaagca
cgacataaagaagtacagaaactaatggataaaataataaaaaatgtataa
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integrated database retrieval system
