Thamnophis sirtalis (common garter snake): 106542206
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Entry
106542206 CDS
T06107
Symbol
SNTB2
Name
(RefSeq) beta-2-syntrophin isoform X1
KO
K24064
beta-syntrophin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106542206 (SNTB2)
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
106542206
NCBI-ProteinID:
XP_013913342
UniProt:
A0A6I9XHJ2
LinkDB
All DBs
Position
Unknown
AA seq
516 aa
AA seq
DB search
MAVWTRARKAGLVEVLLRERWVRAVAELSGEALALSSEPEPRNGLPNGASSAAAAAAASP
SASPERGAGAPSPPSPPRGSAPGSPPAGVRRVRVVKAEAGGLGISIKGGRENRMPVLISR
IFPGLAAERCGALHLGDAILAVNGLDLRDATHDQAVQALKRAGREVLLEVKYMREATPYI
KKPSLVSDLPWDGAFPQSPSLSLSLSEESGSPKHQSPPQDRKVIPLKMCYAARNLSMPDL
ENRLIELHSPDSRNALILRCKDTATAHSWFTAIHSNIMALLPQVLAELNAMLGASHAPGS
SREVKQIAWLAEQARLDGGRQHWRPVLLAVTEKDLLLFDSVPWTRDAWASPCHSYPLVAT
RLVHSGCRSPCLGSDLSFATRSGSRQGIEMHVFRVETHRDLSTWTRTLVQGCHAATELIK
EVSVGCVWNSQDVRLTIHYENGFTVSSEGTGSTGLLLRYPFEKLKMSADDGVRNLYLDFG
GPEGELALEMHSCPKPLVFVLHTFLSAKVTRLGLLA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtggacgcgcgcccgcaaggccgggctggtggaggtgctgctgcgggagcgc
tgggtgcgggcggtggccgagctgagcggggaggcgctggcgctgagctccgagccggag
ccgcgcaacgggctgcccaacggcgcctcctccgccgccgccgccgccgccgcctcgccc
tccgcctcccccgagcggggcgccggagccccctccccgccctccccgccgcggggctcg
gcgccgggctcccctccggccggggtgcggcgcgtgcgggtggtgaaggcggaggcgggc
gggctgggcatcagcatcaagggcgggcgcgagaaccgcatgccggtgctcatctcgcgc
atcttcccggggctggcggccgagcgctgcggggcgctgcacctgggcgacgccatcctg
gccgtcaacggcctcgacctccgcgacgccacccacgatcaggccgtgcaggcgctcaag
cgggccggccgggaggtcctgctggaagtgaagtacatgcgggaggccactccgtacatc
aagaagccgtcgctggtgtccgacctgccgtgggacggggcgtttccgcagtcacccagc
ctcagcctcagcctcagcgaggagtctggctccccaaagcaccagagccccccacaggac
cgcaaagtcatccctttgaagatgtgctacgctgccaggaacctgagcatgccggacctg
gagaacaggctgattgagctgcattcgcccgacagccggaacgccctgattcttcgctgc
aaggacacggccacagcgcattcatggttcacggcaatccacagcaacatcatggccctc
ctcccacaggtcctggccgagctcaatgccatgctgggggccagccacgcgccaggcagc
agcagggaggtgaagcagatcgcctggctggccgagcaggccaggctggatggcgggcgg
caacattggcggccggtccttttggccgtgacggagaaggacctgctgctctttgactcc
gtgccctggacgagggacgcctgggcctccccctgccacagctaccctctggtggccacc
aggctggtgcattcaggctgcaggtcgccctgcctgggatcagacctcagctttgccacg
cggtccggttctcgccagggcatcgagatgcacgtcttccgtgtggagacccaccgtgac
ctctccacctggaccaggaccctggtgcagggctgccatgccgccacagagctcatcaaa
gaggtctccgtaggctgcgtctggaacagccaggacgttcggctcaccatccactatgag
aacggcttcaccgtgagcagcgagggaaccggttccaccggcctcctcctccgatacccc
tttgagaagctgaagatgtctgctgacgatggcgtccgaaacttgtacttggactttggc
ggcccagagggggaactggccctggagatgcactcctgccccaaacccttggtcttcgtc
ctgcacaccttcctgtcggccaaagtgacccgcctgggcctcctggcctag
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