Thamnophis sirtalis (common garter snake): 106542259
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Entry
106542259 CDS
T06107
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106542259 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106542259 (NIPBL)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
106542259 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd3
Cnd1
DNA_repr_REX1B
MIF4G
Motif
Other DBs
NCBI-GeneID:
106542259
NCBI-ProteinID:
XP_013913399
UniProt:
A0A6I9XCS6
LinkDB
All DBs
Position
Unknown
AA seq
2768 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARNPNVFREKSMQNRYGVQS
GMMMPQYKLSQNSMHGSPASSNYQQTTISHSPSSRFVPPQSSSGNRFMAPQNSPVPSPYA
PQSPAGYLPYSHPPSYTPHPQMQQASVSSPIVSGGMRNIHENKITSQLGSSTNHHPDNTR
HGSSEDYLHMVHRISSEDGDSSIRNTTSFSLRSPQSVCSPAGSDGTPKGSRPPLILPSQP
PPYSSPRDVPPDILLDSPERKQKKQKKMKLVKDEKDQTEKAAMYDIISSPSKDSTKLTLR
LSRIRSSDMDQQDDMLSGLENSNASEGDISFNVQYPGQTSKTPVTPQDINRPLNAAQCLP
QHEQTAFLQAQQVPVLQPNTSVSAKQPQNPLVQTHPQVSQHGTITPYDEVELDALAEIER
IERESAIERERFSKEVQDKDKPLKKRKQDSFPQEAGGATGGNKPASQDTNSAGNGSRPAL
MVSIDLQQAGRADSQAVLTQDLDIIKKPEEIKQCNDGSLFIAQDDVIGVLKLKTENFPET
LRKKSDSEGIKMEVQHNENKQTGIQQNEGKRIEIKHCESKQAEVKHESKHENRQVDVKQN
EAKQNNGKQEARQRPETPKQKNEVRPDTPKQKNEGRPETPKQKNEGRPETPKHRHENRRD
SNKSSLEKKLDVSKHKMDIKSDPSRVKSEKSDSLKQRTDGRSISDSVRRDHDGLKQKTED
RGESERYRGDPSKLRRPEYLRSSSKSEHDSKHIIRTDNTKAERLDRKHRHESGESRDKLS
SGDQRSRPDSPRIKQESKLRTDRPSFKSQNSKDDRRTDGNKSKMDSSKAHGDSKTEFPSY
LLGGRSGALKHFIIPKIKRDKDGNVMHEVRKSEFKGEPKNKVEKIGLVEDLNKGAKPVVV
LQKLSLDDVQKFIKDREDKSRSSCFRSNKNKSSKSSKGSIDQSVLKELPPELLAEIESTM
PLCERVKMNKRKRSTVNEKPKYAEISSDEDNESEEAFETSRKRHRKDRNDDKAWEYVEHD
RRSGDHKRSAHYHEGRRSSGSSRYRGRSPEDSDVDDYSPPPSLSEVARKMKKKEKQKKRK
AYEPKLTPEEMMDSSTFKRFSASVENILDNLEDMDFTAFGDDDEMPQELLLGKHQLSELG
SESAKIKAMGIMDRLSTEKTVKVLNILEKNIQDGAKLSTLLNHNNDTEDEERLWRDLIME
RVTKSADACLTAINIMTSPHMPKAVYIEDVIERVIQYTKFHLQNTIYPQYDPVYRLDPHG
GGVLSSKAKRAKCSTHKQRVIVMLYNKICDIVSSLAELLEIQLLTDTTILQISSTGITPF
FVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDTDG
EPMYIQMVTALVLQLIQCVVHLPSGEKDSNSEEESNKKIDQDVLITNSYETAMRTAQNFL
SIFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTE
MALRVASLDYLGTVAARLRKDAVTSKMDQGSIARILKQVSGGDDEIQQLQKALLDYLEEN
TETDASLLFSRKFYIAQWFRDTTMETEKAMKSQKDEDSSEGTHHSKEVETTGQIMHRAEG
RKKFLRKIIKTAPSQFSTLKMNSDTVDYEDACLVVRYLASMRPFAQSFDIYLTQILRVLG
ENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCR
PQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGI
KKLVNETFQKLWFTPTPHNDKEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDA
SYKPVKKACTQLVDNLVEHILKYEESLADSDNKGLNSSRLVACITTLFLFSKIRPQLMVK
HAMTMQPYLTTKCSNQNDFMVICNVAKILELVVPLMEHPSETFLATMEEDLMKLIIKYGM
TVVQHCVSCLGAVVNKVTQNFKFVWACFNRYYGALLKLKSQHQEDPNSTILTANKPALLR
SLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQ
HPGLMFEQEVKTLYNNILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADREWKKVAKQE
DLKEMGDISSGMSSSIMQLYLKQVLEAFFHAQSSVRHFALNVIALTLNQGLIHPVQCVPY
LIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCRKDPVRGF
RQDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADNLGCFPYQT
QEEPLFIMHHIDITLSVSGSNLLQSFKESMVKYKKEKKPSSDEESESESNSESDSESEEE
IQKPRKSSRKRANSDSDTDEENDINAVMKCLPDNSAPLIEFANVSQGILLLLMLKQHLKN
LCGFSDTKIQKYSPSESAKVYDKAINRKAGIHFHPKQTLDFLRSDMANSRLTEDVKRNIV
KQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPRNNAAETEEDESDGED
RGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVVQKTSNGFS
VQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKVVQTLRSLY
AAKDGTSS
NT seq
8307 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggatcgctagtcttact
gatcttttgaatcagctgcctcttccatcacctttgcccgccacaactacaaaaagcctg
ctctttaatggacgaattgcagaggaggtgaactgtcttttggcttgtagggatgaaaat
ctggtttcacaacttgtacacagcctcaaccaggtgtcaacagatcacatagaattgaaa
gataaccttggcagtgatgatccagagggagatataccagtcttgctgcaggctgtcctg
gcaaggaatcctaatgttttcagggaaaaaagcatgcagaacagatacggggtacaaagt
ggaatgatgatgccacagtacaaactttctcagaattccatgcatggtagtcctgcatct
tccaattatcagcaaaccactatctctcatagtccttcaagtcgatttgtgccaccacag
tcaagttctggtaatagattcatggcaccacaaaacagtccagtgcctagtccatatgct
cctcagagccctgcaggatatttgccatattcacatcctccaagttacacgcctcaccca
cagatgcaacaagcttcagtatccagccctattgtttcaggtgggatgaggaatatacac
gaaaataagattacaagtcagttgggcagttcaaccaatcaccatcctgataacaccagg
catggctctagtgaagactacctacacatggtgcacagaataagcagcgaagatggtgat
tcttcaataaggaacactacatcattttccttgagatcaccacagtcagtatgttctcct
gctggaagtgatggaactccgaaaggatcaagaccacctttaatacttccatctcaacct
ccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaaaga
aagcaaaagaaacaaaagaaaatgaaattagtcaaggatgaaaaagaccagactgaaaaa
gctgcaatgtatgatattattagttctccatccaaggactcgactaaacttacattaaga
ctcagtcgtataagatcttcagatatggaccagcaagatgacatgctttctggtttggaa
aacagtaatgcatcggaaggggatatttcttttaatgtgcagtatccaggacagacatct
aaaacgccagttactccacaggatattaataggcctctaaatgctgctcagtgtttaccg
cagcatgaacaaacagcattcctccaggcgcaacaagtgcctgttttacaaccgaacact
tcagtttctgcaaaacaacctcagaatcctttggtacagacacatccacaggtttcacag
cacgggactattacgccatatgatgaagtagaattggatgcattggctgaaattgaacgg
atagaacgggaatcagctattgaaagggaacggttttcaaaagaagtgcaagacaaagat
aagcctttaaagaaacgaaaacaagattcctttccacaggaggctggaggtgctacagga
ggaaataaaccagcttctcaggacacaaattctgcaggaaatgggtcacgaccagccttg
atggttagtatcgatctacagcaagccggacgggcggactctcaggcagttcttactcag
gacttggacattatcaaaaagcctgaagagataaaacagtgtaatgatggttctctattc
attgcccaagatgatgtaattggagtactaaaactaaaaactgaaaacttccctgaaact
ctaaggaaaaagtcagattctgaaggtataaaaatggaagtacaacataatgagaacaaa
caaacaggaatacaacaaaatgagggtaaacggatagaaattaaacactgtgaaagcaag
caagcagaagtcaaacatgaaagcaaacatgaaaacagacaggtggatgtgaaacaaaat
gaggccaagcaaaataatggcaagcaggaagcaagacaaagacctgagactccaaaacaa
aaaaatgaagtgaggccagatactccaaaacagaaaaatgaaggcagaccagaaacccca
aagcagaagaatgaaggcaggccagaaacccctaaacacagacatgaaaacaggcgtgat
tctaataaatcttcattggaaaagaagctcgatgtatctaaacataaaatggacattaaa
tctgatccatccagggtgaaatctgaaaagtctgactcattaaaacagaggactgatggg
cgttcaatttctgattctgtaagacgggatcatgatggccttaaacaaaaaactgaggat
agaggtgaatcagaacgatatagaggagatccatcaaagttacgaagaccagaatatttg
cgatcttcaagtaaaagcgaacatgattctaaacatatcattagaactgataacacaaaa
gcagagagactagacaggaaacacagacatgaatctggtgagtcccgggataagctgtca
tctggagatcagagatcaagaccggacagtcctcgtattaaacaggaaagtaaattaaga
actgatagaccaagttttaaatcacagaacagtaaggatgatcggaggacagatggtaat
aaaagcaaaatggatagtagtaaagcacatggagatagtaaaactgagtttcccagttat
ttgttggggggaagatctggggctttaaaacattttatcattccaaaaataaaacgtgat
aaggatggcaatgtcatgcacgaagtaaggaaatcagaatttaaaggtgaaccgaagaat
aaggttgagaagattggactagtagaagatctaaataaaggagctaaaccagtagttgtt
ctgcaaaagctttctttggatgatgtacaaaaatttattaaggatagagaagacaaatca
agaagctcttgtttcagatctaataaaaacaagtcatccaaatcaagtaaaggtagcata
gatcagtcagtgttaaaggaattacctccagaactactagcagaaattgaatccaccatg
ccactttgtgaacgagtgaaaatgaataaacgtaagcgtagcacagtaaatgaaaaacca
aaatatgctgaaattagttctgatgaagacaatgaaagtgaagaggcctttgaaacttct
cggaaaagacatagaaaagaccgaaatgatgacaaagcctgggaatatgtagaacatgac
agacgttctggagatcataaaaggagtgcccattatcatgaaggaaggaggagttctggt
agcagccgataccgcggtcgaagtccagaagattcagacgtggatgattattctcctcct
cctagtcttagtgaagtggctagaaaaatgaagaaaaaagaaaagcaaaagaaaaggaaa
gcttatgaaccaaagttaactcctgaagaaatgatggattcttctacattcaagagattc
agtgcttcagttgaaaatattttggacaatttggaggacatggattttactgcatttggt
gacgatgatgaaatgcctcaggagttattactggggaagcatcaactaagtgaattgggt
agtgaatcagctaaaattaaggccatgggcattatggataggctttcaactgaaaaaaca
gtgaaagtcctgaacatcttagagaaaaatattcaagacggcgcaaagctttcaactctg
cttaatcataataatgatactgaagatgaagaaagattatggagagacttgattatggag
agagtcacaaaatctgccgatgcctgtcttacagctatcaacattatgacatcaccccac
atgcccaaagctgtatatattgaagatgtaatagaaagagttattcagtacactaagttt
cacttgcagaacacaatttatcctcaatatgatcctgtttatcgattggatccacatggt
ggtggtgtgttaagctcaaaagcaaagcgtgccaagtgttccactcataaacagagggta
atagtgatgctgtataacaaaatttgtgacattgttagtagtttggctgaattactagag
atacagcttctaactgacactacaattcttcaaatttcttcaacgggaataacacctttc
tttgtagaaaatgtcagtgaacttcagttgtgtgccatcaaactagtcactgctgttttc
tcaagatacgaaaaacataggcaattaatattagaagaaatttttacttcacttgcaagg
ttaccaaccagcaaaaggagtttgagaaatttcagattgaacagcagtgatacagatggg
gaacctatgtatattcagatggtgactgcattagtcctacaattaattcagtgtgttgtg
catctaccatcaggtgaaaaagattctaattctgaagaggaatcaaataaaaagattgat
caggatgtcctcattacaaattcatatgaaacagctatgaggacagcacaaaacttcctt
tctatttttctcaagaaatgtggtagcaaacaaggtgaagaagattatagaccacttttc
gagaactttgttcaagatcttctttccactgtcaataaaccagaatggccagctgcagaa
ttgctacttagtttactgggaagattactggttcatcaattcagtaataaatcaacagag
atggctttgagagtggcatcacttgactatcttggaactgtagcggcacgattgagaaaa
gatgcagttactagcaaaatggatcaaggatctatagctcgaattttaaaacaggtctca
ggaggcgacgatgaaatccaacagttgcaaaaggcattattagattatttggaagaaaat
acagaaactgatgcatcattactgttttctcggaaattttatatagctcagtggtttcgg
gatactactatggagactgagaaagcaatgaagtctcagaaggatgaagactcatctgaa
ggaactcaccattcaaaagaggttgagacaacaggacaaattatgcatcgagcagaaggt
cgcaaaaaattccttcgaaaaatcattaaaacagcaccatctcagttcagtacattaaag
atgaattctgatactgtggactatgaagatgcttgcttggttgtgcgctatttggcctct
atgaggccgtttgcccagagcttcgatatttatttgacacagattctgcgtgtgcttggt
gaaaatgcaatagctgttcgaacaaaagccatgaagtgtttgtctgaagtagttgctgtg
gaccccagcattctagccaggttggatatgcaacgaggtgttcatggacggttaatggat
aattccacaagtgtgcgagaagcagctgtggagttactgggtcggtttgtgctttgtcga
ccacagcttgccgaacagtattatgacatgctgattgagcgaatattggatactggtatt
agtgtcagaaaaagagtaataaagattcttagagatatctgcattgaacaaccaaccttc
cccaaaattacggaaatgtgtgtgaaaatgattcgcagagttaatgatgaagaaggcatt
aagaaattggtaaatgagacattccagaaattatggttcactccaaccccacataatgac
aaagaagctatgaccagaaaaatcctgaacatcacagatgtggttgcagcttgtagagat
acaggatatgattggtttgaacagcttcttcagaatttgttaaaatcagaagaggatgcg
tcatacaaacctgtcaagaaagcctgtactcaacttgtggacaatttggttgagcatatt
ctgaagtatgaggaatctttggcagattctgacaacaagggtttgaattcaagtcgcttg
gtagcttgcataaccactttatttttattcagcaaaatcaggcctcagttaatggtcaaa
catgctatgaccatgcaaccatatcttacaactaaatgcagtaaccaaaatgacttcatg
gtcatctgcaatgttgctaagatcttagaattggtagtgccactgatggaacacccaagt
gagactttccttgctacaatggaagaagatcttatgaagctcataatcaaatatggcatg
acagtagtgcagcactgtgtcagctgtcttggagctgttgttaacaaagtcacacagaat
tttaaatttgtatgggcttgttttaatagatactatggtgcacttttaaaactaaaaagt
caacatcaagaagatccaaatagcactatacttacagcaaataaaccagcactcctaaga
tccctttttactgttggagctctatgccggcattttgattttgatcaagaagattttaaa
ggcaacagtaaggttaacataaaggataaagtacttgaattgttaatgtattttaccaaa
cattcagatgaggaggtacaaacaaaagctatcattggtctaggattcgccttcatacaa
cacccaggtctaatgtttgaacaagaggtgaagacattgtataataatattctctctgat
aaaaactgctcagtgaatttaaaaatccaggtgttgaaaaatctccagacataccttcaa
gaggaagatacacgtatgcagcaggcagatagagaatggaagaaagtagcaaagcaagaa
gatctgaaagaaatgggtgatatttcctcagggatgagcagctccatcatgcagctatat
ctcaaacaagtcctagaagcattctttcacgcacaatccagtgttcgtcattttgcgctc
aatgttattgcactcacattaaaccagggtcttatccatccagttcagtgtgtaccatat
ttaatagcaatgggcacagatccagagccttctatgaggaacaaagcagaccaacagctg
gtggaaatagacaaaaaatacgctgggtttattcatatgaaagcagtggccggcatgaag
atgtcttaccaagtacagcaggcaatcaatacttgccgaaaagatcctgtgaggggcttt
agacaggatgaatctagcagtgctttgtgctcccatctttactccatgatccgagggaat
cggcaacaccggcgagcctttcttatttctttgctcaacctctttgatgacacagctaaa
acagaggtgaatatgcttttgtatatagccgacaatctgggctgttttccttatcagacc
caggaagagccactttttataatgcatcatatagatattacattatcagtttctggtagc
aaccttctacagtcatttaaagagtctatggtaaaatataagaaagaaaaaaagccttcc
tctgatgaagaaagtgaaagtgagagcaatagtgaaagtgacagtgaaagcgaggaggaa
attcagaaaccccggaaatcatcacgaaaacgtgcaaattctgattcagacactgatgaa
gaaaatgatatcaatgcagtcatgaagtgtttgccagacaattcagctcctttgattgaa
tttgcaaatgtctcccagggcatcttgttgcttttgatgttgaaacagcatttgaagaac
ctgtgcggattttctgatactaaaattcagaaatactcaccttctgagtcggcaaaagtt
tatgataaagcgataaacagaaaagcaggaattcacttccacccaaaacaaacgctggac
ttccttcgaagtgatatggctaattccaggctcacggaagatgtgaagaggaatatagtg
aaacaatacttagatttcaaacttcttatggaacatttggatcctgacgaagaggaagaa
gacggggaagtgtcagcaagcacaaatgctcgtaacaaagctattacctcgctgctcgga
ggtggcagccctaggaacaatgcagctgaaacagaggaggatgagagtgatggggaggat
agaggaggaggcacttcagggtcattgagaaggtcaaaacgaaattcagactctacggag
ttggcagcacagatgaatgaaagtgttgatgtcatggatgtcatcgctatttgctgtcca
aagtacaaagatcgaccacaaattgcaagagtagtgcagaaaaccagcaatggcttcagt
gttcaatggatggcaggctcctacagtggctcctggactgaggctaagcgccgtgatggc
cgcaaactggtgccttgggtagacactatcaaagagtcagacattatttacaaaaaaatt
gctctaacgagtgctaataagctgactaataaagttgttcagactttacgatcgctgtat
gccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
