Thamnophis sirtalis (common garter snake): 106542303
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Entry
106542303 CDS
T06107
Name
(RefSeq) peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03320
PPAR signaling pathway
tsr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106542303
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
106542303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106542303
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tsr03310
]
106542303
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106542303
Nuclear receptors [BR:
tsr03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
106542303
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
106542303
NCBI-ProteinID:
XP_013913464
UniProt:
A0A6I9XCY9
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MVDTEMPFWPMNFGISPVDLSTMDEHSHEFDIKPFSTVDFSSLSSPYYEDLPLARTDQIA
LDYKYDVKFQSCQNAIKVEPPSPPYFSEKLQMYSKPHEEASCSLMAIECRVCGDKASGFH
YGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRF
GRMPQAEKEKLLAEISSDIDQLNPESADLRALAKLLYDSYIKSFPLTKAKARAILTGKTT
DQSPFVIYDMHSLMMGEDQIKCKHLTPMQEQNKEVAIRIFQRCQFRSVEAVQEITEFAKN
IPGFVSLDLNDQVTLLKYGVHEIIYTLLASMMNKDGVLISNGQGFMTREFLKSLRKPFSD
FMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDSLLQSLELQLK
LNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQIIKKTETDMSLHPLLQEIYKDLY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggttgataccgaaatgccgttttggcccatgaactttggtattagcccagttgatctt
tctacaatggatgaacactcccatgaatttgacataaagcccttcagcactgttgatttt
tccagcctttcttctccatattatgaggaccttcctcttgcaagaactgaccagatagcc
cttgactataaatatgatgtgaaatttcaaagttgtcaaaatgcaattaaagtggagcct
ccgtctccaccatatttctcagaaaaacttcagatgtatagtaaacctcacgaagaagcc
tcttgttctctcatggctattgaatgcagggtgtgtggggacaaagcttctgggtttcat
tatggagtgcatgcatgtgaaggttgcaagggtttctttcgcagaacaatccgtttaaaa
ttaatctatgatcgatgtgatctcaactgccgcattcataaaaaaagtagaaataaatgt
caatattgccgattccaaaagtgccttgcagttggaatgtctcataatgctattaggttt
gggcgaatgccacaagctgagaaggagaaactcttggcagagatttcaagtgacattgac
cagttgaatcctgagtctgctgatctgcgagccctggccaagctgctctatgattcctac
ataaagtctttccctctgaccaaagccaaggcgagggcaatcttgacaggaaagacaaca
gaccaatcaccatttgtcatttatgacatgcattccttaatgatgggagaagaccagatc
aagtgtaaacatttgacccccatgcaagagcaaaataaagaagtggccatacgtatcttc
cagcgctgccagtttcgctcggtggaagctgttcaggaaatcactgaatttgccaaaaac
attccaggttttgtgagtttagacctcaatgaccaagtaactctcctgaaatatggagtg
catgagatcatctatacactcctagcctccatgatgaataaagatggtgttctcatatcc
aatggacaaggattcatgactcgggagttcctaaagagtctgcggaaacctttctctgac
tttatggagccaaaatttgagtttgctgtcaaattcaatgcactggaattagatgacagt
gacttggcaatatttatagctgtcattattctcagtggagatcgccctggattacttaac
gtgaaacctattgaagatattcaagatagtttgctgcaatcactagaactccagttaaag
ctgaatcacccagaatcatcacagctgtttgcaaaattgttgcagaaaatgacagacctc
agacagattgtaacagaacatgtgcagctgttgcaaattataaagaagacggagacagat
atgagccttcatccactcctacaagaaatttacaaagatttgtattaa
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