Thamnophis sirtalis (common garter snake): 106542314
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Entry
106542314 CDS
T06107
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106542314
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsr01002
]
106542314
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106542314
Enzymes [BR:
tsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106542314
Peptidases and inhibitors [BR:
tsr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106542314
Ubiquitin system [BR:
tsr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106542314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
HEAT_Maestro
RP-C
Motif
Other DBs
NCBI-GeneID:
106542314
NCBI-ProteinID:
XP_013913477
UniProt:
A0A6I9XHV6
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MPDSTITLKPPEFSIMEPLVVMLDSPRPLTLAMCQFLAEMQETKKGSVTPRELFSQICKK
ATRFKGYQQQDSQELLRYLLDGMRTEEIQRTSAAIFKALNNSDKENEELKKEVKEYEKKK
LMHSFVDRIFGGELTSTIMCEECQTVSLVHEPFLDLSLPVLNDQKNSKKNNVKKSQQKEI
DSCEENMENECYVKERDEIPVTSKHLQKKTKKMARKQAKNQRHQQKFQEKVIHLTDSDVT
EKTEADHDCNKQAIESNSDIRCLKPEEEESLNTCEEHCVDKKCVDEPESTVQVQITEKHV
ENADSCDQEANNEVNLDVSIKEFVPATECVNKFNDLHLKEDKDEEDDIISDFSKLFLEEE
EPSDDTDSLHEFYGFETQTYEVVNEDPETAFCTLADRDTVNMEENSIIHCLNQFTHTEKL
CENNKLLCEVCTRNQLCGIKTNKINAKKYVYTNAKKQMLISLAPPILTLHLKRFQQAGYN
LQKVNKHISFPEVMDLAPFCSTKCKNVREGTSEVLYSLYGIVEHSGTMRSGHYTAYVKTS
TTSQLSDLVNDKIQQTSESESPRRQWFHISDTHVQAVSLSKVLKSQAYLLFYERIL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattcaacaattacacttaaaccaccagaattctcaataatggaacctttggta
gtaatgcttgattctccaagacctctaacactagcaatgtgccagtttctggcagaaatg
caagagacaaaaaaaggatctgtgacccctagagaacttttctctcagatttgtaaaaaa
gcaacacgattcaaaggatatcagcagcaggacagccaagagttgcttagatatctattg
gatgggatgagaactgaagaaatccaaagaacaagtgctgcaatttttaaggcactgaat
aattctgacaaagaaaacgaagagttgaaaaaagaggttaaagaatatgaaaagaaaaag
ctaatgcatagttttgtggaccgcatttttggtggcgaattaacaagtacaatcatgtgt
gaagagtgtcaaacagtttctttggtacacgaaccatttcttgatttgtcactccccgtc
ttaaatgatcagaaaaatagcaagaaaaataatgttaaaaaatcacagcaaaaagaaatt
gacagttgtgaagaaaacatggaaaatgaatgttatgtgaaagaaagagatgaaattcct
gttacaagtaagcatctacagaaaaagacaaagaaaatggccagaaaacaagcaaagaac
caacgccatcagcagaaatttcaggagaaagttattcatctaacagatagtgatgtcact
gaaaaaactgaagctgatcatgattgtaataaacaagcaatagaaagtaactctgacata
aggtgtctgaaaccagaagaggaagagtcattaaacacatgtgaagagcattgtgtggat
aaaaaatgtgtagatgagccagaaagtacagttcaagtacagatcacagaaaaacatgtt
gaaaatgcagacagttgcgatcaagaggcaaataatgaagtcaatttggatgtttctata
aaagagtttgttcccgctacagagtgtgtcaataagtttaatgatttgcatcttaaggaa
gataaggatgaagaagatgatattatcagtgacttcagcaaattattcctggaggaggaa
gagccgagtgatgatacagatagtttgcatgaattttatggttttgaaacacaaacatat
gaagtagtaaatgaagatccagaaacagcattttgtactcttgcagacagggatactgta
aacatggaagaaaattcaattattcattgcttgaatcagtttactcatactgagaaactt
tgtgaaaacaacaaattgctttgtgaagtgtgcacccggaatcaactttgtggaatcaag
acaaataaaataaatgccaagaaatatgtatacactaatgccaaaaaacaaatgcttatt
tctctcgctcctccaattttaaccctccatttaaaaagatttcaacaggctggatataat
ctccaaaaagtaaacaagcacatatcgtttcctgaagttatggatttggctcctttctgc
tcaactaagtgcaagaacgtaagagaggggacttcagaagtattgtactcgttatatggt
attgtggaacatagtgggactatgagatctggtcattatactgcttatgtgaagacaagt
accaccagccaactttctgatcttgtcaatgacaaaattcaacaaacttcagaatctgag
tcacccagaaggcaatggtttcatattagtgacactcatgtgcaagcagtatccctatcc
aaggtcctgaagtcacaagcatatcttctcttctatgaaagaatattgtaa
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integrated database retrieval system
