Thamnophis sirtalis (common garter snake): 106542324
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Entry
106542324 CDS
T06107
Symbol
INO80
Name
(RefSeq) DNA helicase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106542324 (INO80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsr03036
]
106542324 (INO80)
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
106542324 (INO80)
INO80 complex (yeast)
106542324 (INO80)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
106542324
NCBI-ProteinID:
XP_013913490
UniProt:
A0A6I9Y5V6
LinkDB
All DBs
Position
Unknown
AA seq
1554 aa
AA seq
DB search
MASELGSGEDGNCTELATPLYLRYLEKALRLDHFLRQTSAIFNRTASSDESEDGLDDNPL
LPQPGSPLMQVKEEPATSLLGEPSGAGSSAMLNTHSLNGVLQSEPKTEKGSLYNFSKLKK
SRKWLKNILLSDDSSDSESEIDEDGEGEEFTLSREELHNMLRLHKYKKLHQNKYSKDKEL
QQYQYYSAGLLSTYDPYYEQQRHLIGPKKKKLKEEKKLKAKLKKVKKKKRRDEDVSSEES
PRRHHHQIKVFAKFSHDTPPPGSKKKHLSIEQLNARRRKVWLSIAKKELPKAYKQKVSAR
NLFLSNSRKLAHQCMREVRRAAIQAQKNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKR
AEKEALEQRKLDEEMREAKRQQRKLNFLITQTELYAHFMSRKRDTGHDEIQEEILRKLED
SSIQRQIDIGGGVVVNITQEDYDSNYYKVQALKNAEDAFRIHQAQTRSFDEDAKESRAAA
LRAANKFGTGFGESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGI
LADEMGLGKTVQSIALLAHLAERENIWGPFLIISPASTLNNWHQEFARFVPRFKVLPYWG
NPNDRKVIRKFWSQKTLYTQDASFHVVITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSS
SSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMPTLFDSHEEFNEWFSRDIESH
AENKSAIDENQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQQTSRQKLLYQALKN
KISIDDLLQSSMGTTQQAQNTTSSLMNLVMQFRKVCNHPELFERQETWSPFHISLKPYQI
SKFLYRHGQIRVFNHSRDRWLQFLLSPFAPDYIQQSLFHRRGAEKGSCFSFLRFIDVSPA
ELANLMHKGHLARWLALFLSLKAAYRLHHFRFWKEQEKEDQHQSRYLKNQDFVLDVSFPL
SPLNLHSCTLLQGLVFTSHCKAVIGHSDYIVHQQPATSWKQYCQITELPSFLSVVSPRVT
AVPLDFYCNDRSAEYERKALKEGGTLEAKQCVFYGAPELVTSWLKRCSQLFPEAPGGLLG
LKPPNGWSFVRIPDKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMV
YRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDW
NPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDT
LKPKEVVSLLLDDEELEKKLRQRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGRK
RKEGINLVVPFVPSADNSNLSADGDESFVSVESAMPSPFSEISFNSELHMGSIPPDESSN
DMLVIVDDPASSAPQSRATNSPASVTGSVSDNMNGISVQDLPLTGRGHSGRSRGRPKGTN
SGSKSTTKSRSRKSTAGSAAAMAGAKAGAAAASAAAYAAYGYNVSKGMPSGSPLQTPLIR
PAGLSDFGLSSASSSLSKGNSVCGSSKNLSLASSLAPETPIRKQYKGAHISGGR
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagagctgggttcaggagaggatggcaactgcacagagctggcaacgcctctc
tatctgcggtatttggagaaagctctgcggttggatcactttttacgacagacttctgcc
atcttcaataggactgcatccagtgatgaaagtgaggatggattggatgacaatcctttg
cttcctcagcctgggagtcccttgatgcaagtgaaggaagagcctgcaacctcattgctt
ggagaaccttctggagcaggaagttcagcaatgttaaacacacattcactcaatggagtg
ttacaatctgagccaaaaacagaaaaagggagtctatataacttttccaaattgaagaaa
agcagaaaatggctaaagaacattcttctgagtgatgactccagtgacagtgaatcagaa
attgatgaagatggggaaggagaagaattcactctttcaagagaagaacttcacaatatg
ctgcgattgcacaagtacaaaaaactgcatcaaaataaatacagcaaagataaagagtta
cagcagtatcagtattacagtgcaggtttgctgtctacatatgatccttattatgagcaa
cagcgtcatctcatagggccgaagaaaaagaagttgaaagaggaaaaaaaattaaaagca
aaattgaaaaaggtgaaaaaaaagaaaagaagggatgaagacgtttcatctgaggagtca
ccacgacgtcatcaccaccagataaaagtttttgccaagttttctcacgatacccctcca
ccagggtctaagaaaaagcatttatccattgaacaattaaatgcacgccggaggaaagta
tggctaagcattgctaaaaaggaactgcccaaggcatacaagcaaaaagtctctgcccga
aatttattcttgagtaatagcagaaagctggctcaccagtgtatgagagaagtgcgtcga
gcagctattcaagcccaaaagaattgcaaggaaactctaccaagggcacgtcggcttaca
aaagagatgcttctgtattggaaaaaatatgaaaaagtggaaaaagagcaccgcaaaaga
gcagagaaagaagcattggaacagcgcaaattggatgaggagatgagagaagctaaaaga
cagcagagaaaacttaacttcctaataacccaaacggagttgtatgctcacttcatgagt
cgcaaacgagatacaggacatgatgaaattcaggaagaaattctgaggaaacttgaagat
agttctatccagagacagattgatattggtggaggagttgttgtcaacattactcaagaa
gattatgatagtaactattacaaggttcaggcgttgaagaatgctgaagatgcttttcga
attcatcaggcccaaaccaggtcttttgatgaagatgctaaggagagccgggcagctgca
cttcgagctgccaataaatttggcactggctttggagagagctacagccttgccaaccct
tccatccgggcaggagaggacattccacagcctaccattttcaatggcaaattaaaaggt
taccaattgaaaggcatgaattggctagccaacctttatgagcagggcatcaatggtatc
ctagcagatgaaatggggctgggtaaaactgtgcagagtattgccttattagcgcatctg
gctgagagagagaacatctggggcccctttttaattatttcaccagcttccacattaaac
aactggcatcaggagttcgccagatttgttccaagatttaaggtgctaccatattgggga
aatcccaatgacagaaaagtgatcaggaaattctggagtcagaagactttgtatactcag
gatgcttctttccacgtggtgatcaccagttaccaacttgtagtccaagatgtcaagtat
tttcagcgggtgaaatggcaatatatggtgttggatgaagcacaggcactcaagagtagc
tccagtgtccgctggaaaattttacttcagttccaatgtcgaaacagactattgctgact
ggaacacccatccaaaacactatggctgagctctgggctttgcttcatttcattatgcca
acattgtttgactcccatgaagagttcaatgaatggttttctagagatattgaaagccat
gcggaaaataaatctgccattgatgagaatcaactgtcacgtttgcacatgatcctgaaa
ccttttatgttgagaagaatcaagaaagatgtagaaaatgaactgtcagacaagatcgag
attcttatgtattgccagcagaccagtcgacagaaattattatatcaagctctgaagaat
aagatttcaattgatgaccttttacaatcctccatgggaactactcagcaagcccagaac
actactagtagccttatgaaccttgtcatgcagtttaggaaggtctgcaatcatccagag
ctctttgagcgacaagaaacatggtctccatttcacatttcactaaagccatatcagatt
tcaaagtttctttatcgtcatgggcagatcagggtgtttaaccattcacgggacaggtgg
ttgcagtttttactttctccttttgcaccagactacattcaacagtctctgttccataga
agaggtgctgagaaagggagttgtttctctttcctacggtttattgatgtttctccagca
gaattggcaaaccttatgcataaagggcacctagccagatggttagctcttttcctgtct
ctgaaagccgcctacaggctccaccactttcgattctggaaggagcaagaaaaagaagac
cagcatcaatctcggtatctgaagaatcaagattttgtgctggatgtcagcttcccactc
tcccctctcaacttgcacagctgcactttgctgcagggccttgtattcacaagccactgt
aaagcagtaattggccactcggattacatcgttcatcaacagccagctacctcatggaaa
cagtattgtcaaatcacagagctgccgtcctttctgtctgttgtgagcccacgggtaaca
gctgttccattggatttctattgcaatgatcgcagtgcagaatatgagcgtaaagcactt
aaagaaggaggaactcttgaagcaaagcaatgtgtgttttatggggcgcctgaactagta
accagctggctaaaacgatgctctcagttgtttcctgaagccccaggaggactattgggg
ctcaaacctccaaacggctggtctttcgtcaggataccagacaaagagagcttgatcaca
gacagtggaaagctttatgctcttgatgttctattgacaaggctaaaatctcaaggacac
agagtccttatctactctcagatgacacggatgattgacttattggaggaatatatggtt
tataggaagcatacatatatgcggctagatggctcctcgaaaatttcagaaagaagagat
atggtagctgactttcagaacaggaatgatatttttgttttcttactaagcacgagagct
ggtggtttaggcattaatcttacagctgctgacacagtcattttctacgatagtgactgg
aatccaacagtggatcaacaggctatggatcgagctcacaggttgggtcaaacaaaacaa
gtcactgtgtatcgactgatttgtaaaggcactattgaggagcgcatcttgcaaagggct
aaagaaaaaagtgagattcaaaggatggtgatttcaggtggcaatttcaaaccagacacc
ttgaaaccaaaggaagttgttagtctacttctggatgatgaggaacttgaaaaaaaattg
cgtcaacgtcaggaggagaaacggcaacaggaagaaacaaatcgtgtcaaagagcgtaaa
cgtaaaagggaaaagtatgctgaaaagaaaaagaaggaagatgagttagatgggagaaaa
aggaaagaaggcatcaatcttgtggttccgtttgttccatctgcagataattcaaatctt
tcagctgatggtgatgagtcttttgttagtgtggagtctgccatgcccagccctttcagt
gagatttccttcaacagtgagttgcacatgggttccatcccccctgatgagagcagcaat
gatatgcttgtgattgtagatgatccagcatcttctgcacctcagtcaagagctaccaac
tccccagcttccgtcactggctctgtttctgacaacatgaatggcatttcagtacaagat
ttgcctctcacaggaagaggtcattcgggtagaagtcgaggtcggcccaaaggtacaaac
agtggatccaaaagcacaacaaaaagccggagccgaaaatcaactgcaggaagtgcagct
gccatggcgggggctaaagccggagcagctgctgcctcagctgcagcctatgcagcctat
gggtacaacgtgtctaaaggtatgccttcaggtagccctctccagactccacttatacga
cctgctggactttcagattttggattatcaagcgcctcttcctccttgagcaaaggaaac
agtgtttgtggatcttctaagaacttaagcttagccagttccttggcaccagaaacccct
attcgaaaacaatataaaggagcccatatttcaggtggacggtag
DBGET
integrated database retrieval system
