Thamnophis sirtalis (common garter snake): 106542393
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Entry
106542393 CDS
T06107
Name
(RefSeq) SCO-spondin-like
KO
K24434
SCO-spondin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
106542393
Domain-containing proteins not elsewhere classified [BR:
tsr04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
106542393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
TSP1_spondin
TIL
TSP1_ADAMTS
Pacifastin_I
FnI_RECK
TSP1_CCN
TILa
VWF
VWC
Motif
Other DBs
NCBI-GeneID:
106542393
NCBI-ProteinID:
XP_013913580
UniProt:
A0A6I9Y5Z4
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MEGTRGQKRKTQEAKNTRHERSKTRSTEAKNGRHKRPKTEDTRSQEHEAREVKNAKHRGQ
KWKAQEAKNVRHGGGDGSEDGGLTPWSPWTPCSKTCSDPDLPAVKTRRRFCLGGNGCAGD
TVQERECNLPQCTETPVCEDKDCFGLNCTWNPWSSWSECSRSCGVGQQQRLRTYHPPGQG
GHWCQDILTANLERRFCNLPACKVDGVWSKWSPWSWCDRTCGGGRSARTRTCTSPPPKNG
GRHCPGEKYHVRVCNPHPCEETCPPMMHWVGCANECPRHCWDLQEGIVCQEKEACEPGCR
CPDGTLEQDGTCVPLTHCECTDAQGHSWAPGSQYDVGCNNCTCAPGGRILCTNYTCPPTE
CIWSLWSSWSQCSVTCGNGLRTRFRTPTSGSWAPDCLMEQVQTHPCALDSCPPLCVHEGR
ETSLGSTWLLGECQQCICTPEGIYCLDITCIVHGGWTPWSPWSDCPMTCGGSVQIRTRAC
INPPPRNQGLPCVGPDTQSQNCSTQPCPEDELCPWSAWSPCSQSCGTGLTSRTRSCVCST
ASAGAEGSLCTENSHPQETEACYLRACRDCPWSPWTPWTHCSCSFLVQQRYRNQQGWETD
REPCLGLDGQFRMCNYSQCSESSCDPPFEFRACGSPCDSHCSTLKSPELCKDIPRCLPGC
YCPQGLLEQRGSCVPPAQCACLHPHQAGGPVFMAAGDSVLIGCKKCVCQAGELQCSSQGC
HGLLPLSGWSPWTACSDCLLLVALGPRVFPPLLAQTSWPSLPAQVSVQYRYRFCLDPQTG
QIWRGPGGLCIAELEEQLLCLDETNACQDFCQWSEWGVWSPCQAPCSGGFRLRQRVALNP
NAEQDCKGLRFQSETCNMAPCPGNEAGVSRA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcacaagaggccaaaaacggaagacacaagaagccaagaacacgaggcacgag
aggtcaaaaacgcgaagcacagaggccaaaaatggaaggcacaagaggccaaaaacggaa
gacacaagaagccaagaacacgaggcacgagaggtcaaaaacgcgaagcacagaggccaa
aaatggaaggcacaagaggccaaaaacgtgaggcatggaggcggcgatgggtctgaggat
ggcggcctgaccccctggtccccctggacaccctgttccaagacctgcagcgatcccgac
ctccccgccgtcaaaacccgtcggcggttttgcctgggaggaaacggctgcgcgggagac
accgtgcaggaacgagaatgcaacttgccgcagtgcacagagacccccgtgtgtgaggac
aaagattgcttcggcctgaactgcacctggaacccctggtcctcctggagcgagtgttcc
cgcagctgtggggtcgggcagcagcagcgtctgcgcacctaccaccctcccggccaaggt
gggcactggtgccaagacatcctgacggccaatttggagaggcgtttctgtaacctgcca
gcttgtaaagtggacggggtctggtcaaagtggagcccctggtcgtggtgtgaccggacc
tgtgggggtgggcgctccgcccgcacgaggacttgcaccagcccaccccccaaaaatgga
gggcgccactgccctggcgagaagtaccacgtgcgcgtttgcaaccctcatccctgtgag
gagacatgccctcccatgatgcactgggtggggtgtgccaacgagtgtccccggcattgc
tgggacctccaggaaggcatcgtgtgccaggagaaagaagcctgcgagcctggatgtcgc
tgccctgatggtacgttggagcaagatggcacctgtgttcccctcacccactgcgagtgc
accgatgcccaaggacacagttgggcaccaggcagccagtacgacgttggctgcaataat
tgcacatgtgcccctggagggaggattctctgcaccaactacacctgtcctcccaccgag
tgcatctggagtctctggtccagttggtcccagtgtagcgtcacctgtgggaatggcctg
cgcacccgcttcaggactcctacctccggttcctgggcccccgactgcctgatggagcag
gtgcagacccacccctgtgccttggattcttgcccccctctgtgcgtgcacgagggccgg
gagaccagcctgggcagcacctggctcctcggggagtgccagcagtgcatttgtacccca
gaaggcatttattgcctagacattacctgcatagtgcatggtggatggaccccgtggtcc
ccctggtccgactgtccaatgacctgcggtggaagtgtccagatccgaactcgcgcctgc
atcaacccaccaccacgcaaccaaggcttgccctgtgtgggccccgacacccagagccag
aactgctccactcaaccctgcccagaagatgagctgtgtccctggtcggcgtggagcccg
tgctcgcagtcctgtggcactggactgacctcacgtaccaggagctgtgtgtgctcgact
gcttcggcgggcgctgagggaagtctttgcaccgagaatagccatccccaggagacagag
gcttgttacttgcgggcctgcagagattgtccctggagtccctggaccccctggactcac
tgctcgtgcagcttcctggtgcagcagcgctaccggaaccagcaaggctgggaaactgac
cgggaaccgtgcctgggactggatgggcaattccggatgtgcaattattcccagtgttca
gagtccagctgtgaccccccctttgaattccgggcgtgtggctctccctgcgacagccac
tgctccaccttgaagagccccgagttgtgcaaagacattccacgctgcttacctggttgt
tactgcccgcagggcctgttggagcagaggggttcgtgtgtgcccccagcgcagtgcgcg
tgtctccacccccaccaggcaggagggcccgtgttcatggcggccggagactccgttctg
attggctgcaagaaatgcgtctgccaggcaggagaactccaatgcagcagccagggatgc
catgggctgctaccgttgagtggctggtcaccatggacagcctgttctgactgcttgctg
ctggtggccctcgggccccgggtcttccctcctctgttggcccagacctcctggccttcc
ctgccagcccaggtctccgttcagtaccgctaccggttctgcctggacccacagaccggc
caaatttggaggggcccaggcggcctttgcatcgcggagctggaggagcaactactttgc
cttgatgagaccaatgcctgccaagatttctgccagtggagcgagtggggggtgtggagc
ccctgccaggccccctgcagcggggggttccgtctgcgccagcgggtcgccctgaaccct
aatgcggaacaggactgcaagggactgcgattccagtcggagacttgcaacatggcccct
tgtccaggtaatgaggcgggggtctcccgtgcctga
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integrated database retrieval system
