Thamnophis sirtalis (common garter snake): 106542404
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Entry
106542404 CDS
T06107
Symbol
RFX4
Name
(RefSeq) transcription factor RFX4
KO
K09174
regulatory factor X 4
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106542404 (RFX4)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Other basic domains
RF-X
106542404 (RFX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
106542404
NCBI-ProteinID:
XP_013913594
UniProt:
A0A6I9XD96
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MHCGLLQEPDMDSTESWIERCLSESENKRYSSHTSLANVSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVIKQTVAYSPRSKLGTLLPE
FPNVKELNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDELSVSRRFSQILRRQTSL
NHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSQEEHRKLIIQLYQEFDH
LLEDQSPIESYIEWLDSMVDRCVVKVAAKRPGYLKKVAPQFLLMWSCFGTRVIRDMTLHS
APSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGGTGIVEVREEIIVAEPVPSS
PSPVAFSPAKSATSVDVPSVPSPITSQSPEYAGLATTTGAMQSYTWSLTYTVTTAAGSPA
ENSQPLPCMRSPHVPHSSVTHRIPVYHHREEHGYTGSYNYGTYGNQHSHPMQSQYPSLPH
DSTISAPLHYSAYHRNSSQYPFNSPSSRMEPCLMSSTPRLHPSPVTPRWPEVPSANPCYT
SPPMHSTRYGNSNDMYTPLTTRRNSEYEHMQHFPGFAYINGEATTGWAK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggttgctgcaggaacctgacatggattccacagagagttggattgaaaga
tgtctcagtgaaagtgaaaacaaacgttattccagccacacatctctggcaaatgtttct
aatgatgaaaatgaggagaaagagaataacagagcatccaaaccacactctaccccagca
actctgcaatggttggaggagaattacgagattgcagaaggtgtctgcattcctcgaagt
gccctctacatgcactatttggatttctgtgagaaaaatgatactcagcctgtcaatgct
gctagttttggaaagataataagacaacagtttccacagttaacgacacgaagattagga
accagaggccaatcaaagtaccattactatggcattgcagtgaaagaaagctcccagtat
tatgacgtgatgtattctaagaaaggagcagcctgggtcaatgaaacaggaaaaaaagaa
gtaatcaaacagacagtggcatattcaccacgatccaaacttgggacgttgctgccagaa
tttccaaatgtcaaagaactaaatctgccagccagcctgccagaagagaaggtatctact
tttataatgatgtacagaacacattgtcaaaggatacttgatactgtaataagagccaac
tttgatgagttgtcagtatccagaagattttctcagattcttcggaggcagacatcgtta
aaccatctatgtcaggcttcaagaactgtgatccacagtgcagacattacattccaaatg
ctggaagattggaggaatgtggatcttaacagtatcactaaacaaacactgtacaccatg
gaagattcgcaagaggagcacaggaaacttataatacaattatatcaggaatttgatcac
cttttggaagaccagtcacccattgaatcatacatcgaatggctagattccatggtggat
agatgtgttgtgaaggtagctgcaaaaagaccaggttacctgaagaaagtggccccgcag
ttcctcttgatgtggtcctgttttggcacaagagtaattcgggatatgactttgcatagt
gcccctagcttcggatcttttcaccttattcacctgatgtttgatgactatgtgttgtac
ttgttagaatcactccactgccaggagagagccaatgaactgatgagggcgatgaaaggt
ggcactggaatagttgaagtacgagaagagatcatagtggcagaacctgtcccatcgagt
ccctcccctgttgctttctctccagcgaaatctgccacctcagtggatgttccatccgtt
ccctctcctataaccagtcagtccccagagtatgctggcttagcaaccaccacaggggcc
atgcagtcctatacatggtctctcacgtatactgtaactacagctgctggatcacctgct
gaaaactctcaaccgctgccttgcatgagaagtcctcatgtccctcattcatctgtgaca
cataggatacctgtttatcaccacagagaagagcatgggtacacgggaagttacaactat
ggtacttacggaaaccagcactcccacccaatgcagagccaatatccatctttaccacat
gacagcactatttctgcgcccctccattactcagcttatcacagaaactcttcacagtac
cctttcaatagcccgtcttcacggatggagccatgcttgatgagcagcaccccaagattg
catccatctccagttacacctcgctggccggaggtgccctcagcaaacccttgctataca
agtccaccaatgcattccacaagatatggaaattccaatgacatgtacaccccgttaacc
acacggagaaattctgaatatgagcacatgcaacactttcctggctttgcctacatcaat
ggggaagcaaccacaggatgggcaaaataa
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