Thamnophis sirtalis (common garter snake): 106542444
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Entry
106542444 CDS
T06107
Symbol
FMOD
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
106542444 (FMOD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsr00535
]
106542444 (FMOD)
Proteoglycans [BR:
tsr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
106542444 (FMOD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRR_LRWD1
LRRNT
LRR_14
FNIP
Motif
Other DBs
NCBI-GeneID:
106542444
NCBI-ProteinID:
XP_013913648
UniProt:
A0A6I9XSJ0
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MHWVSVLILVGICGISLSQYDDQYEDIFWLQQYLRSQSSYSYSPYYEDESPPYSFYSSEP
VGSYVGEPVPEPPVSRECPQECECPPHFSSALYCDTRNLKYLPFVPSRMKYAYFQNNQIV
AIQEGAFDNATNLEWLALHGNQITSEKLGKRVFAKLKNLERLYLDHNNLTKMPHPLPPSL
RELHLAYNQISKIPSNALEGLDNLTALYLSHNRIQEMGSNLKWLNSLILADFSYNQLTKV
PGGLPSTLEQLYLEHNHINAVPDDYFKVSPKLLYVRMSHNILTNEDLSPNAFNTSSILEL
DLSYNQLQKIPRVSTSLENLYLQGNKINEFTIKSFCSFVDIMNFSKLQVLRLDGNEIRRN
HMPSDAPLCLRWANVIDI
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcattgggtttctgttttgatcctagttggcatctgtggaatatccttgagccaatat
gatgatcagtacgaggacatattctggttacagcaatatttacgcagccaatcttcctac
agctactcaccatattatgaagatgagagtcccccatattctttttattcttctgagcca
gttggatcctatgtcggagagcctgtgcctgaaccacctgtttctagggagtgcccccaa
gaatgtgaatgcccccctcatttctcttctgccttgtattgtgatactcgcaatcttaag
tatcttccatttgtgccttctcggatgaaatatgcctacttccagaataaccaaattgtg
gcaatccaagagggagcttttgacaatgcaaccaacctcgagtggttagcactgcatggc
aatcaaataaccagtgagaaattaggcaagagggtctttgccaagctcaagaatctagaa
aggctgtaccttgaccataacaacctgaccaaaatgcctcaccccttgccgccatcactg
agagaacttcacctggcttataatcagatctccaagatcccatccaatgccctagaaggc
ttagacaacctcactgccttgtatctcagccacaaccgtatccaagaaatgggatcaaat
ctcaagtggttaaactctctgatccttgcagatttcagctacaaccagctcacaaaagtc
cctggtgggcttccaagcaccttagaacaactctatttggagcacaatcacataaatgca
gtccctgatgattacttcaaggtctcccctaaattgctatatgtacgaatgtctcacaac
atcctgacaaatgaagatctctccccaaatgctttcaatacaagcagcattctggaactt
gacctctcttataaccagcttcagaagatcccgcgagtcagtacaagccttgaaaatctt
tatcttcaagggaacaaaataaatgaattcaccatcaagagtttttgcagctttgtagac
atcatgaatttttcaaagctacaagtcttgagactggatgggaatgagatccgtcgcaat
catatgccctcagatgccccactatgcctgcggtgggccaatgtcatagacatttag
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integrated database retrieval system
