Thamnophis sirtalis (common garter snake): 106542467
Help
Entry
106542467 CDS
T06107
Symbol
ITGA6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04382
Cornified envelope formation
tsr04510
Focal adhesion
tsr04512
ECM-receptor interaction
tsr04514
Cell adhesion molecules
tsr04810
Regulation of actin cytoskeleton
tsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106542467 (ITGA6)
04514 Cell adhesion molecules
106542467 (ITGA6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
106542467 (ITGA6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106542467 (ITGA6)
04810 Regulation of actin cytoskeleton
106542467 (ITGA6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106542467 (ITGA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsr04147
]
106542467 (ITGA6)
04515 Cell adhesion molecules [BR:
tsr04515
]
106542467 (ITGA6)
04090 CD molecules [BR:
tsr04090
]
106542467 (ITGA6)
Exosome [BR:
tsr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106542467 (ITGA6)
Exosomal proteins of breast milk
106542467 (ITGA6)
Cell adhesion molecules [BR:
tsr04515
]
Integrins
Integrin alpha subunits
106542467 (ITGA6)
CD molecules [BR:
tsr04090
]
Proteins
106542467 (ITGA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Herpes_LMP1
Fn3_VIN3
DUF4381
Motif
Other DBs
NCBI-GeneID:
106542467
NCBI-ProteinID:
XP_013913679
UniProt:
A0A6I9XDH2
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MLSLFYLCLWAGIARAFNLDTDNVVKWGGEPGSLFGFSLAMHQQLNPNKRLLLVGAPRQK
AFPLQQANRTGGLFSCNIETPELPCKRIKFDETADPKKESKEDQWMGVTVQSQGPGGKIV
TCAHRYEKRYYVNTEQETRDIIGRCYVLSQDLSISADEYMDGGEWSFCDGRLRGHEKFGS
CQQGVAATFTRDNHYIVFGAPGTYNWKGVVRAEQKNHTLDEMGIFDDGPYEVGGESLRKE
SMVPVPANSYLGFSLDSGKGIISQEEVTFVSGAPRANHSGAVVLLKKDSDIQRTLSSVHI
FEGEGLASSFGYDVAVVDLNHDGWQDIVVGAPQYFDRDGEIGGAVYVYINQEGKWDRVHP
IRLNGSKDSMFGIAVENIGDVNKDGFSDIAVGAPYDGEFGRVYLYHGSRNGINTKPAQIL
DGATNNVIFFGYSITGNMDLDGNAYPDIAVGSLSDTVSVYRSRPVISIKKSIMISPEKID
LNVRNCEVSSNLCLNIRSCFEYTASESSFNQKIILDYTFDVEHERRRLGLPARVHFSNPR
SVSLNGTVTLEIQQMEKCVTKRLELEEKIKDKLRPIPVSLSIAIHTPETTEKPRRQGRSL
PDLTPILNASEPNTVHSEVQFLKEGCGSDNICHSNLKMHYKFCTKEGNDERYAYFPMENN
VPVLVLKDQKDIALEITVTNSPSNAMHPLKDGEDAHEARLVATFPDSLTYSSLRINQAYL
EKPIACRPNSNGSQVDCELGNPFKRNSTVTFYVILSTTKVNVDTKELDINLKLETTSNQT
NLEPITARAKVVIELLLSLTGVAKPSQVYFGGNINGESAMKSEDEIGSLIEYEFRITNLG
KPLKTLGTAFLEIMWPKELRGGKWLLYLVSIHSKELGELQCTPQNEINLLNVQRSRNSRI
KREVAEKQTDGSKSFSLFSERKSKTLECNEEANCVNITCSLQGLDSKAIVVLRSRLWNST
FLEEFYKMNYLDILVRARIGLSAADNVKLTNEATNVRVTVFPAKTVALYYGVPWWIILVA
ILTGLLMLALLVFLLWKCGFFQRSRYDDSIPRYHAVRIRKEERQIKDGKAKENHAKKQWI
TKWNGNESFS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgcttttctacctgtgcctctgggctggaatcgcccgcgccttcaacctggac
actgacaacgtcgtcaaatggggcggcgagcccggcagccttttcggattctccctcgcc
atgcatcagcagctgaaccccaacaagaggctcttgctggttggtgcacctcggcaaaag
gctttcccattgcaacaagctaacagaaccggaggtttgttcagctgcaacatcgaaact
ccagaacttccctgcaaacgtatcaaatttgatgagacagctgacccaaaaaaagaaagc
aaagaagatcagtggatgggtgtaactgtgcaaagtcaggggccaggtggaaaaattgtg
acctgtgcacaccgctatgagaaaaggtactatgtcaacacggaacaggaaacccgagac
atcattgggagatgctacgtgctgagtcaggatctttccatttccgccgatgagtatatg
gatggtggggaatggagtttctgtgacggccgattgaggggccatgagaaatttggctcc
tgccagcaaggtgttgcagccacatttaccagagataatcattacattgtatttggtgca
ccagggacctataactggaaaggcgtggtgcgtgcagagcaaaagaatcacacccttgat
gaaatgggcatctttgatgatgggccttatgaagttgggggtgaaagcctgcgaaaggag
tccatggttccggttcctgctaacagttatttagggttttctctggactctggaaaaggg
atcatctctcaggaggaggtcacttttgtttctggtgccccgagagccaaccatagtgga
gctgtggtccttctgaaaaaagacagtgacatccagcggaccttgtcctcagtacacata
tttgaaggcgaggggctggcctcttccttcggctatgatgtggctgtagtggacctcaac
cacgatggttggcaagatattgtggttggagctccacagtattttgacagagatggagaa
attggtggtgctgtctatgtgtatattaatcaggaaggcaaatgggacagagtacaccca
atccgcctcaatggatccaaagactccatgtttgggattgcagttgaaaacattggtgac
gttaataaagacggcttttcagatattgctgtgggggctccttatgatggagagtttggc
agggtgtatctctatcatggctccaggaatgggataaacacaaaaccagcacagattctt
gatggcgcgacaaataatgtcatattctttgggtactctatcactggaaatatggatctt
gatggaaacgcttaccctgacattgctgttggatctctttcagatactgtttcagtttac
agatcaaggcctgtgataagcattaagaaatccattatgatctctccagagaaaattgat
ctgaatgtgaggaactgtgaagtgtccagtaacctttgcctgaacattagatcatgtttt
gaatatacagccagcgagagtagcttcaatcaaaaaataattttggactatacgtttgat
gtagaacatgagaggaggcgattaggcttgccagcaagagtgcatttttctaaccctcgc
tctgtttcattaaacggaactgtaactctcgaaatacagcagatggaaaagtgtgtgact
aagaggctcgaattagaggaaaaaatcaaagataaattacgtccaattcctgtatctctt
agcattgcaattcatacccctgagaccaccgaaaaacccagaagacaaggaaggtcactg
ccagatcttactccaattctgaatgctagtgagcccaacacagtgcattcagaagtgcag
tttctgaaagaaggctgtggatcagacaacatatgccacagcaatctgaagatgcattac
aaattttgcaccaaagagggaaacgacgaaagatatgcctatttccccatggaaaacaat
gttccagtgcttgttctcaaagaccagaaagatatcgcccttgaaatcacagtgaccaac
agtccttccaatgccatgcacccactgaaagatggcgaagacgctcatgaagcgagactt
gtagcaacctttcccgacagcttgacttattcttctctcagaataaatcaagcttatttg
gaaaaacccattgcctgtcgtcctaattcaaatggctctcaagtggactgtgaacttgga
aatcctttcaaaagaaattctaccgttaccttttatgtaattttaagtacaaccaaggtt
aatgtcgatacgaaggagctggatatcaatctgaaattggaaacgacaagcaatcagact
aatttggaaccaattactgcaagagctaaagttgttattgaactgcttttatcacttaca
ggggttgctaaaccttcccaggtgtattttggtggtaatatcaacggggaaagtgcaatg
aaatctgaagatgagatcggtagtttaattgaatatgaattcaggatcaccaacttaggt
aaaccactgaaaacacttggtacagctttcttggaaattatgtggccgaaagaactgaga
ggaggcaagtggttgctctatttggtttccattcattcgaaggaattaggagaattacag
tgtactcctcaaaatgaaataaaccttttgaatgttcagcggtctcgaaattctcggata
aaacgtgaagttgcagagaagcagacagatggtagcaaaagcttttctttgttttcagaa
agaaaatctaagacattggaatgcaacgaagaggcaaactgcgtcaacataacatgttcc
ttgcaaggcttagacagtaaagccatagtagtactacgctcaaggttgtggaacagcact
ttcctagaggaattctataaaatgaattatctagacattcttgttagagctagaattggc
ctctctgctgcggataacgtcaagctgacaaatgaagctacgaatgttcgagttaccgtc
tttcctgcaaaaacagtagctttatattatggagttccttggtggatcatcttggttgct
attctcactgggttattaatgcttgctttgttggtgttcttattgtggaagtgcgggttc
ttccagcgttccaggtacgatgacagcatcccccgctaccatgctgtaagaattcgtaag
gaggaaagacagattaaagatggaaaagctaaagagaaccatgcaaaaaaacagtggatc
acaaaatggaatggaaatgagagtttttcctag
DBGET
integrated database retrieval system
