Thamnophis sirtalis (common garter snake): 106542469
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Entry
106542469 CDS
T06107
Symbol
LRRTM1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
106542469 (LRRTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_NXF1-5
LRR_EndoS
LRRNT
HemY_N
SNaCT12
Motif
Other DBs
NCBI-GeneID:
106542469
NCBI-ProteinID:
XP_013913681
UniProt:
A0A6I9XHW7
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MDFLLIGVCLNWLLKKPPGLILCSLGVFLKMLPAVHTGCPQLCRCEGRLLYCESLNLTEM
PHNLSSVMGLSLRYNSLSELRDGQFTGLTQLTWLFLDHNHLYSVEAHAFQKLRRVKELTL
SSNKITQLSNSTFRPMPNLRSVDLSYNNLQALEPDLFHGLRKLTTLHMRSNALKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLLSLHSLCL
RRNKVTLVVNSLDWVWKLEKMDLSGNEIDYIEPHVFESVPHLQSLQLDSNRLTYIHPRIL
NSWKSLVSISLSANAWDCGRNICALATWLSTFKGRYDNNLLCATPEYAQGEDVLDAVYAF
HLCEDATDLTTDGDLLSAGVNHSDPTAGYNPSTLNSDLQEAEGDGITDVMTPTVPNEKTE
NAVQIHKVVTGTMALIFSFLIVVLILYVSWKCFPVSLRQLRQCFVTQRRKQKQKQTMHQM
AAMSAQEYYVDYKPNHLEGALVIINEYGSCTCHQQPARECEV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttctcattggggtctgtttaaactggctgctgaaaaagcccccagggttg
atcctgtgtagcctgggtgtttttttaaaaatgcttccagccgtgcacactgggtgtccg
cagctttgccggtgcgagggcaggctcctctactgcgagtcgctgaatctcaccgagatg
ccgcacaacctgtcgagcgtgatgggtttgtcattgcggtacaacagcctctcggagctg
cgtgacggacagttcaccgggttaacgcaactcacgtggctgtttctggatcacaatcac
ctttactccgtcgaggcgcatgcctttcaaaagctccggcgggtgaaagagctcacgctg
agttccaacaagatcacccaactgtccaacagcactttccggccgatgccaaacctacgc
agcgtggatttatcctacaacaatctgcaggctttggagccggacctgttccacggcttg
cgcaagctcaccacgttgcacatgcggtccaatgcccttaagtttgtgcctgtccggatc
ttccaggactgccgcagcctcaagtttctcgacataggatacaatcagttgaagagcctg
gctcgcaactcttttgcgggcttgttcaaactcaccgagttgcacctggagcacaacgac
ttggtgaaagtcaacctggcccacttccccaggttgctctctttgcactccctctgtctc
cggaggaataaggtcacgcttgtggtgaactccttggactgggtgtggaagttggagaaa
atggacctctccggcaacgagatcgactacattgaacctcacgttttcgaaagtgtacct
cacctccagtcccttcaactggactccaaccggctcacctacatccaccccaggatcctc
aactcctggaagtctcttgttagcatcagcctctcggccaacgcctgggattgcggccgg
aacatctgcgcgttggccacttggctcagcacttttaaaggccgctacgacaacaacttg
ctctgtgccacccctgagtatgcacagggcgaggacgtcttggatgctgtctatgctttt
cacttgtgcgaagacgccacggacctcaccaccgatggggacctcctctcggctggggtc
aaccacagtgacccgacggccggctataacccttcgactctgaactctgacctgcaggag
gccgaaggggatggaatcaccgacgtcatgacccccaccgtccccaacgagaagactgag
aacgccgttcagatccacaaggtggtgacggggaccatggccctcatcttctccttcctt
attgtggttttgatactgtatgtctcctggaaatgcttcccggtcagcctcaggcagctg
aggcagtgttttgtgacccagcgtcggaagcagaaacaaaaacagactatgcatcaaatg
gctgccatgtcagcccaggaatattacgttgattataaacccaatcacctcgaaggagct
ctggtgatcataaatgaatatggatcctgtacgtgccaccagcagccagccagggaatgc
gaggtgtga
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