Thamnophis sirtalis (common garter snake): 106542474
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Entry
106542474 CDS
T06107
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106542474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsr03009
]
106542474
Ribosome biogenesis [BR:
tsr03009
]
Eukaryotic type
Pre-60S particles
RNases
106542474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
106542474
NCBI-ProteinID:
XP_013913690
UniProt:
A0A6I9Y644
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Position
Unknown
AA seq
760 aa
AA seq
DB search
MLCSSGFFRGIECPYGQACGRPYCHFRHPPGAQHTTDGPIPPRRLLALSGPGRRPATVGG
CGYDPYNPELPKPVAQDSNGTLENIVSSASGILELELFDKAIEAAKNEVEREQKKYEELL
ETTKEYGSSEPPLLASKAAGLTTSNPFSSLEYNPGGYNANSGNDYNPTPLAVVASSQSSK
YTLDSFNNTKCKGSSLEYVPTVVTQPKKYSSSAVNSKYIIDNSKPSTDLEYDPLSNYSAR
LMSKAKEQKGTKRKREVDCEDAYSPSFKKYCDETSNDEPIARFSDSEDECREASAIPLKS
KGGSESKLGTAKEKGAPPIDTSSRQMKETAVQYDMGDIESPQGNAVKDLVEKNAKLVKAP
SNRDAKAKEKNKVASKDKLKKKKEDDHKGKQAKKNQVKIGDKEKTGVKAQHKNGERSKEK
PSKSHVDRQALKLHKPKSGITPGIKEENSGKNKDVGKAAATEKSGTSRKESKFQPVELKR
KPQIPSGTEQNKRKDKQPALKRSKETLTNSQAKENSEAKRKIKQRSLSHVDLFGDESGEE
ELVGQPLLRFPDVSLDSVREDAGFSLPYDNGRANVKKRKLCQAPPASSSSSSSSSDDDEV
DYSHLENDLDFESDPMEECLRIFNESTDVKTEDKGRMGKQMSKEEGSEEKLTEDSLTTLF
PGQKKRISHVTKQGHVEVPSKPVVRPYRPPTAQEVCYQRIQLAQKQAAQLAQQRPKQPLP
PPVKIPVAPQRTSIVMHKGERKRVAHVPNAALSAVSKLGK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctcgagcggcttcttccgcggcatcgaatgcccctacgggcaggcctgcggg
aggccctactgccacttcaggcacccgcccggggcccaacacaccaccgatggccctata
ccgcctcgacgccttttggccctgtctggtcccggcagacgccccgccacagtcggaggg
tgtggttatgacccctacaacccagaacttcccaaacccgtggcacaagacagcaatggc
actttggaaaatatcgtctcatcagcttctgggattctggagcttgagctgtttgacaag
gcaatcgaagccgccaagaatgaagttgaacgtgagcaaaagaagtacgaagagctgctg
gagacaactaaagagtacggctcctctgaaccccctttacttgcttctaaggctgctgga
ttaacaacatccaacccgttcagttctctggagtataacccaggtggttacaatgcaaac
agtggtaatgactacaaccctactcctcttgccgtggttgcttctagtcagtccagcaaa
tatactttggactccttcaacaacacgaaatgcaaaggcagctcactggaatacgttccc
actgtggtcactcagccgaagaagtacagcagctctgctgtcaacagcaaatacataatc
gacaactccaagccttcaacagatttagaatatgatcctctttcaaattattctgccagg
ctgatgagcaaagctaaagaacagaaggggaccaagcggaagagggaagttgattgtgag
gacgcatattctccttcattcaagaaatattgtgacgaaactagcaatgatgagcccatt
gcccggttctctgactcggaggatgaatgccgtgaagcttctgccatcccccttaaatct
aaaggaggctcagaaagcaaattgggcacagccaaagaaaagggagccccaccaatagat
accagttcccggcaaatgaaagagactgctgtgcagtatgacatgggggacattgagagc
ccgcagggaaacgctgtcaaagatttagtggagaaaaatgccaagttggtcaaagcgcct
tctaaccgagatgcgaaagccaaggaaaagaacaaagtggcctcaaaggataagttgaaa
aagaaaaaggaggatgaccacaagggtaagcaggcgaagaaaaatcaagttaaaatagga
gacaaggagaagacgggtgtgaaggcacagcacaaaaatggggaaaggagtaaggagaaa
ccaagcaagtcccacgttgataggcaggcactgaagctccataagcccaaatctgggatc
acacctggaattaaggaagagaactctggcaagaacaaagatgttggcaaagctgctgct
actgaaaaatcagggactagtaggaaagagagcaagttccagcctgtagagttgaaaagg
aagccccaaatccctagtggaactgaacagaataagagaaaagacaagcaaccagccttg
aaaaggtccaaggaaaccttgaccaactcccaggccaaggagaattcggaggccaaacgc
aagattaaacagcggtccctgagccacgttgatctctttggggatgagagtggagaggag
gagctggtgggccagcctcttcttcggttccctgatgtgagtttggactcagtcagagag
gatgctggcttctctttgccctacgacaatgggagggcaaatgttaagaaacgtaagtta
tgccaggctcctcctgcttcctcctcctcctcctcctcctcctctgatgatgatgaggtt
gattattctcacctagagaatgatttggactttgagtctgacccaatggaagagtgcctt
cggatttttaatgaatccactgatgtcaaaacagaagacaaaggcagaatgggaaaacag
atgtcaaaagaggaagggagtgaagaaaagttgacagaagatagtttaaccacactcttt
cctggacaaaaaaagaggatttctcacgtaacaaagcaagggcatgttgaagtcccaagc
aagccagtggtccggccttaccgacccccaactgcccaagaggtctgttaccagaggatt
cagctagcgcagaagcaggcggctcagctggcccagcagcggccaaagcagcccctgccg
ccgcccgtaaagattcctgtggcaccccaaagaacctccattgttatgcacaaaggagaa
aggaagcgagttgctcatgtgcccaacgcggctctttcggcagtctccaagttgggcaag
tga
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