Thamnophis sirtalis (common garter snake): 106542603
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Entry
106542603 CDS
T06107
Symbol
GPC6
Name
(RefSeq) glypican-6
KO
K08112
glypican 6
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsr00535
]
106542603 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tsr00537
]
106542603 (GPC6)
Proteoglycans [BR:
tsr00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
106542603 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tsr00537
]
Others
106542603 (GPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
106542603
NCBI-ProteinID:
XP_013913856
UniProt:
A0A6I9XIH9
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All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MVAGMGALLWAPLGLLLSLRAGAADVKTRSCGEVREAYKTKGFSLVNIPYQEIAGEHLRI
CPQEYTCCTSEMEDKLSQQSKLEFENLMDKTSHFVRTTFVSRHKKFDEFFRELLENAERS
LNDMFVRTYGMLYMQNSEVFQDLFIELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPH
YHFSEDYLECVSKYTDQLKPFGDVPRKLKVQVTRAFIAARTFVQGLTVGREVANRVSKVS
PTPGCIRALMKMLYCPYCRGLPTVKPCNNYCLNVMKGCLANQADLDTEWNLFVDAMLLVA
DRLEGPFNIESVMDPIDVKISEAIMNMQENSVHVTGKVFQGCGQPKPAPGVRSSRSIPDN
FNPRFRPYNPEERPTTAAGTSLDRLRTIWRTMQHGVIDIKEKLKLSKKFWSTLPYTICKE
ETVTAGMSNEEDCWNGHTKAKYLPEIMNDGLTNQINNPEVDVDITRPDTYIRQQIMALRV
MTNKLKNAYNGNDVNFQDTSEETSGSGSGSGCTDDICPTEFEFITTETPLIDSGRREVDS
SASQPSPSVLTGFLLLTVFLLQRHCR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggttgccgggatgggggcgctgctttgggctcccctcgggctgttgctgtcacttcgg
gccggagccgctgacgtgaaaacgcggagctgcggcgaggtgcgggaagcgtacaaaacg
aaaggcttcagcctggttaacatcccctatcaggagatcgcaggggaacacttgagaatc
tgccctcaggaatacacatgttgcacttcagaaatggaagacaaactaagccagcaaagc
aaactggaattcgagaatctgatggacaagacaagccattttgtccgcaccacatttgta
tcgaggcacaagaaattcgatgaatttttccgagagctcctggagaacgcagaaagatcc
ttgaatgatatgtttgtacgaacatacggcatgttgtacatgcagaattcagaagtattc
caggacctcttcatagaactgaaacgatattacacaggaggcaatgtgaacttggaggag
atgttgaatgacttctgggcccgtctattagagcgaatgttccagctcataaacccccac
tatcatttctctgaggactatctagagtgcgtgagcaaatacacagaccagcttaagcct
tttggagatgtacccagaaaactcaaggttcaggtgacgagagctttcatcgcggcaagg
accttcgttcaggggctgaccgtggggagagaagttgctaacagggtatctaaggtgagt
cccaccccaggatgcatccgggcattaatgaagatgctgtactgcccttattgccgagga
ctgcccactgtgaaaccttgcaataactactgcctcaacgtaatgaagggctgccttgca
aaccaagcagatctggataccgaatggaatctcttcgtagatgccatgcttttggtagct
gacagactagagggaccattcaacattgagtcagttatggatcccattgatgtcaaaatt
tctgaagccataatgaacatgcaagaaaacagtgtgcatgtgactggaaaggttttccaa
gggtgtggccagcctaaaccagctccaggcgtaagatcttctcgatccattcctgataac
ttcaaccctcgctttcgaccttataacccagaagaaagaccaacaactgctgctggcacc
agcttggacaggctgaggactatctggaggacaatgcaacatggtgtaattgacattaaa
gaaaaactaaagctttccaaaaagttctggtctacattaccctacaccatctgcaaggaa
gaaacagtgactgctggcatgtctaatgaagaggattgttggaatggacacaccaaagct
aagtatctacctgagatcatgaatgatggactcaccaatcagataaacaatcctgaggtt
gatgtggacatcacccggcctgatacctacataagacagcaaatcatggcactaagagta
atgaccaacaaacttaaaaatgcatacaatgggaatgatgtgaactttcaggacacaagt
gaggagaccagtggctccggtagtggaagcggctgtacagatgacatttgtccaacggaa
tttgaattcatcaccacagaaactcctctcattgactcaggcaggagggaagtggactct
tcagccagccagccaagcccatctgtcctcacaggcttcctccttcttacagtctttctc
ctgcaaagacactgcagataa
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