Thamnophis sirtalis (common garter snake): 106542689
Help
Entry
106542689 CDS
T06107
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr04115
p53 signaling pathway
tsr04120
Ubiquitin mediated proteolysis
tsr04137
Mitophagy - animal
tsr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106542689 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
106542689 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106542689 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
106542689 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106542689 (SIAH1)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106542689 (SIAH1)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106542689 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
106542689
NCBI-ProteinID:
XP_013913963
UniProt:
A0A6I9XTE3
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MTGKSAFSFLYAWKGILDTCLPGNKSNKRKEMSRQTATALPTGTSKCTPSQRVPALTGTT
ASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEK
VANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLM
HQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIV
QLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAE
NGNLGINVTISMC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacggggaaatccgccttcagttttttgtatgcttggaaaggaatccttgatacatgt
ctgccagggaataaaagcaacaaaagaaaagagatgagtcgtcagactgccacagcactt
ccgacaggtacctccaagtgtacaccgtcgcaaagggtacctgccttgacgggcaccacc
gcttccaacaatgacttggccagcctctttgagtgccccgtctgttttgactatgtgctg
ccacctatcctccagtgccaaagcgggcacctcgtttgtagcaattgtcgccccaagctc
acctgttgtccgacctgccgaggaccgttgggttccattcggaatttggctatggaaaaa
gttgccaactctgtactgtttccctgtaaatatgcctcctctggctgcgagataaccttg
ccgcataccgagaaagccgaccacgaagagctttgcgaattcaggccttactcttgcccg
tgccctggggcctcttgtaagtggcaaggctctttggatgctgtcatgccacacctcatg
caccaacataaatcgataacaacactacagggagaagatattgttttccttgctacagac
attaatcttcccggagctgtcgactgggttatgatgcagtcttgctttggctttcacttc
atgttagtactggagaaacaggaaaaatacgacggtcaccagcagttctttgcaatcgta
cagttgataggcacgcggaaacaagctgaaaattttgcttaccgcctcgagctaaacggc
cacaggcggcgattgacttgggaagcaaccccacgatcgatccatgaggggatcgcaacc
gccatcatgaatagtgactgcttagtctttgacaccagcattgcacagctgtttgcagag
aacggcaacttaggtattaatgtgacaatttcaatgtgctga
DBGET
integrated database retrieval system
