Thamnophis sirtalis (common garter snake): 106542786
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Entry
106542786 CDS
T06107
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tsr01001
]
106542786 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsr04121
]
106542786 (TRIM24)
Enzymes [BR:
tsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106542786 (TRIM24)
Protein kinases [BR:
tsr01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
106542786 (TRIM24)
Ubiquitin system [BR:
tsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106542786 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
106542786
NCBI-ProteinID:
XP_013914083
UniProt:
A0A6I9XTR2
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MLPPPAAPSPGGGGGGAPKDPPLPPPPPLLQPSSAPSSPVSAPPSPLHCNPVGVVRCPIC
GQECAERHIIDNIFVKDSTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRA
HQRVKFTKDHTVRQKEEVSPEAVGVTNQRPVFCPYHKKEQLKLYCETCDKLTCRDCQLQE
HKEHRYQFIEEAFQNQKVIIDTLITKLMEKNKYVKYTGEQIQNRIHEVNRNQKLVEQDVK
VAIFTLMVEINKKGKALLHQLECLAKEHRAKLLQQQQEVSGLSKQLEHVMNFSKWAVSSG
SSTALLYSKRLITYRLRYLLRARCDALPVSNTTIQFHCDPSFWAQNIFNLGSLVIEDSEL
PPHMPKSPVTEPNIQSQSGLPSNQLSKFPTQISLAQLRLQHMQQQVLAQRQQAQRRAGPV
GFPEPRIAGAIHQAPPPPPAPLPPPPPPQQPPPRLVNFQNHNFKSIGPVPLAQPVRFPQN
QSIPHASVKPSPLQMAILAQQAIKQWQIHSGQVLATSSSASSTTSTPSSPTINSAAGNDG
KTFAPSMIDLNSTMSGSCTLPSLPDIDCSGSVPLESIGKREAFAEHTQTKQYSRKTVQSP
NSSVPFPGLTGLVTVSGVHPPMRSPSASSVGSRGSSTSSGKPSGADSTQRVPVVMLEPIR
IKQESGAPSENFDFPVVTVKQETDEESRNQNSRFPRTILPTVLLNSNLSSEASALRTEAP
DSTGDQPSNGKATWIGSSHGGDGRKDDDPNEDWCAVCQNGGELLCCDKCPKVFHLSCHVP
TLRNFPSGEWICTFCRDLFKPEVEYDCGVSSHVSEEKRKVEGGPGLAPIDQRKCERLLLY
LYCHEMSLAFQDPVPPTVPDYYEIIKKPMDLSTIKNRLQAQHTIYSKPEDVIADFRLIFR
NCAEFNEPDSEVADAGMKLSSYFEELLKNLFSDRKFSVQPYCHSDKNSPSPTDDSDDEFV
QPRKKRLKWEEHHFFK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacctcccgcggccccttcgccgggtggcggaggcggcggcgcccccaaagat
ccgcctctgccgccgccgccgccgctgcttcagccgtcctcagcgccttcttcgccggtc
tccgcgccgccttcgccgttgcactgtaatccggttggtgttgttcgctgtccaatttgt
ggccaggaatgtgcagaaagacacattattgacaacatctttgtgaaggattctactgaa
gttcccagtagtacagtggagaagtcaaatcaggtttgtacaagctgtgaagacaatgcg
gaagccaatggcttttgtgtggagtgtgtagagtggttgtgcaagacgtgtatacgggct
catcaaagagtgaaattcacaaaagaccatacagttagacagaaagaagaagtttctcca
gaagctgttggtgtaaccaatcaaagacccgtgttttgcccttaccacaaaaaggaacag
ttgaaactctattgtgaaacttgtgacaaattgacatgtcgggattgtcagttgcaggag
cacaaagaacacagataccagtttatagaagaagcctttcagaatcaaaaagtaataatt
gacactcttattacaaaattgatggaaaaaaacaagtatgtaaaatatacaggggagcag
attcaaaatagaatccatgaagtgaatcggaatcaaaaacttgtggaacaagatgttaaa
gttgctattttcacattgatggtagaaataaacaaaaagggaaaagctctgctgcatcag
cttgagtgtctagctaaagaacaccgggcaaagcttttacaacagcaacaagaagtgtca
ggactttctaaacaactggaacacgttatgaacttttctaaatgggctgtctccagtggg
agcagcacagccttattgtacagcaaacgcttgattacataccgattacgttacctcctt
agggcaaggtgtgatgccttaccagtatctaatactaccattcagtttcactgtgatcct
agtttctgggcccaaaatattttcaacttaggttctttggtaattgaagatagtgaactc
ccacctcatatgcctaaaagtcccgtgacggaaccaaacatacagtcacaaagtggctta
ccatcaaatcaactatccaagttcccaacacagatcagtttagctcaacttcgacttcag
cacatgcagcagcaagtgcttgctcagaggcagcaggcacagcggagggcaggccctgtg
ggattcccagaacctagaattgcaggagccatacaccaggctcctccaccaccaccagca
ccactaccacctcctccacctcctcagcagccacctccacgtttggtaaactttcagaat
cacaatttcaaatccataggaccagttcctctcgctcagccagtgaggtttcctcaaaat
caaagcataccacatgcatctgtaaagccatctccactacagatggcaattttggcacag
caagccattaaacagtggcagatccacagtggtcaagttttggctacttcatcgagtgct
agcagtacaacttcaactccctccagtcccactattaatagtgctgctggaaatgatggg
aagacttttgctccatctatgattgatcttaattcaacaatgagtggttcctgtaccttg
ccttctttaccagatattgactgttcaggaagtgttccattggaaagtattgggaagaga
gaggcatttgcagagcacacccaaaccaaacaatattcacgcaaaactgtgcagtctcct
aactcttcagttccatttccaggattgactgggttggttactgtctctggtgtccatcct
ccaatgcgttcacccagtgcctctagcgtaggaagtcgaggcagctctacttcttctggc
aaaccatcaggtgcagattcaacccagagagtccctgtggtcatgttagagcctatccga
ataaaacaagagtctggtgcaccaagtgagaactttgatttcccagttgtcacagtgaag
caggaaacagatgaagaatcccgtaatcaaaattccaggtttccaagaaccattcttccc
acagtgttactgaatagcaatctctcctctgaagcatcagcgttaagaacagaagcacca
gacagtacaggtgaccagccatccaatggcaaggcaacatggataggatcttcacatggc
ggagatggcagaaaagatgatgatcctaatgaggattggtgtgcagtatgtcagaatgga
ggagaacttttgtgttgcgataaatgtcccaaagtgttccacctttcatgtcatgttcct
acactcaggaattttccaagtggtgaatggatttgcacattctgtcgtgatttgtttaaa
cctgaagtagaatatgattgtggtgtctcaagccatgtttctgaagaaaaaagaaaagtg
gaagggggtccaggcttggcaccaatagatcagaggaaatgtgaaagattacttctgtac
ctttactgtcatgaaatgagcctagcttttcaagatccagtccctcccacggtgcctgat
tactatgaaataattaagaagccaatggatttgtcaacaataaagaatagattgcaagca
cagcacacaatatattcaaaaccagaagatgtaatagctgattttaggctaatatttcga
aattgtgctgaatttaatgagcctgattctgaagtagctgatgctggaatgaaactaagt
tcttattttgaggaacttttgaagaaccttttttcagatagaaaattctctgttcagcct
tattgccattctgataaaaacagtccatctccaacagatgactcagatgatgaatttgtg
caaccccgaaaaaaacgcctcaagtgggaagagcaccatttttttaagtaa
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