Thamnophis sirtalis (common garter snake): 106542812
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Entry
106542812 CDS
T06107
Name
(RefSeq) general transcription factor II-I-like
KO
K03121
transcription initiation factor TFII-I
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106542812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106542812
03036 Chromosome and associated proteins [BR:
tsr03036
]
106542812
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
106542812
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
106542812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTF2I
Motif
Other DBs
NCBI-GeneID:
106542812
NCBI-ProteinID:
XP_013914128
UniProt:
A0A6I9XTV9
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MVDQLFCKKFAEALGSTEPKAVPYQKFEAHPTDLYVEGLPENIPFRSPSWYGIPRLEKIL
QVGNRIKFVIKKPELLTVSSTEVTQPRTNMPVKEDWNVRITKLRKQVEEIFNMKFAQALG
LSEAVKVPYPVFESNPDNLYVEGLPEGIPFRSPTWFGIPRLERIVRGSGKIKFIVKKPEL
VTSFLPPELVCKVNTSVNVSVGSQSPSSSNSTRSPVSNSKVPEIEVTVDEGPANRVSTSD
VRTNPQTNGSNTGFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLTEPVKVPFA
LFESYPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFEAAIKENAT
AIPNPQRRTSLCNTVINAVSVPDPVVNTAAGVEDLNIIQVTIPDDDERTSKVEKARQLRE
QVNDLFSRKFGEAIGMGYPVKVPYRKITVNPGCVVVDGMPPGVSFKAPSYLEISSMRKIL
DSAEFIKFTVIRPFPGLVMNNQITEKAEAEVPAATVPAPEQVIQEPVEADQIVQVSVEED
SVQTEEHSQIKQEPDPTW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtagatcagttattctgcaaaaaatttgctgaagccttgggaagcactgaaccaaag
gccgtaccttatcagaaatttgaagcgcatcccactgatctttatgtggaaggtttgcca
gagaatattccatttcggagtccctcttggtatggaatccctcggctagagaaaattctt
caagtggggaataggataaagtttgtaataaaaaagccagaactactcacagtcagttcc
acagaagttactcaaccaagaacaaacatgccagtcaaagaagattggaatgtcagaatc
acaaaattgaggaaacaagtagaagaaatatttaatatgaaatttgcacaagctctgggt
ctcagtgaagcagtgaaagttccttatcctgtctttgagtcaaatcctgataatctgtat
gtagaaggtttgcctgaagggatcccctttcgaagcccaacctggtttggaatccctcgc
ctggaaagaattgtgcggggcagtggaaaaattaaattcattgtaaagaagccagagctt
gttacctcattcttgcctccagaattggtttgtaaagtgaacacttcagtaaacgtctct
gtaggctctcagagtcccagcagctcaaactctacacgaagtcctgtaagcaactctaaa
gttccagagattgaagttactgtagatgaaggtcctgctaatagggtatcaacctcagat
gttagaactaatcctcaaaccaatggatccaatacaggctttaagccaagaggaagagag
ttttcttttgaggcctggaatgccaagattactgatttgaaacagaaagttgaaaatctt
tttaatgaaaaatgtggggaagctcttggactgacagaacctgttaaagttccttttgcg
ctttttgaatcttatcctgaagatttttacgttgaaggccttcctgagggagtgccattc
cgtcgcccatccacttttggcattccaagattggaaaaaattctccgaaacaaagctaag
ataaaatttatcattaaaaagccagaaatgtttgaggcagcaattaaagaaaatgctact
gctattccaaatcctcaaagaagaaccagcttatgtaatactgtgataaacgctgtaagt
gtgcctgacccagtggtgaacacagctgctggagtagaagaccttaacatcattcaggtg
acaataccagatgatgatgagagaacctccaaagtagagaaggcccggcagctgagagag
caagtgaatgatctcttcagtcgaaaatttggggaagctattggtatgggataccctgtg
aaagtcccataccgaaaaatcactgtcaaccctggctgtgtggtggtggatggaatgccc
cctggtgtatcttttaaagctcccagctatcttgaaatcagttccatgaggaagattctg
gattctgcagaatttattaaatttaccgtcattagaccattccctggacttgtaatgaac
aaccaaattactgaaaaagcagaagcagaagtcccagcagccactgtgccagctcctgaa
caggttatacaagagccagttgaagcagaccaaatagtacaagtatctgtggaggaagat
tcagtacagactgaagaacactctcaaataaagcaggagccagatccaacgtggtag
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