Thamnophis sirtalis (common garter snake): 106542830
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Entry
106542830 CDS
T06107
Symbol
PARS2
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial isoform X1
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106542830 (PARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsr01007
]
106542830 (PARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsr03016
]
106542830 (PARS2)
Enzymes [BR:
tsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
106542830 (PARS2)
Amino acid related enzymes [BR:
tsr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
106542830 (PARS2)
Transfer RNA biogenesis [BR:
tsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106542830 (PARS2)
Prokaryotic type
106542830 (PARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
Zn_ribbon_SprT
DM_Arn
Motif
Other DBs
NCBI-GeneID:
106542830
NCBI-ProteinID:
XP_013914147
UniProt:
A0A6I9XJN4
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MPIACCASYSQNFFLWRLVADDLHKKLQEAFNLTKSGTEASSMNVKMNLKMEQLFKTGKI
VLPCLANWVISCQRQSYRSYCNFHKKQKLFPQMNLRDDTEAFQESRSGEPMCKSQTLMLQ
TGLICPANPGCYYYMPYTVRAMEKLIKVLDQEMQAIGGQKVNLPTLCSGRLWKASGRWEL
MGKELLRVTDRHSQEYCLGPTHEEAITDLVASQGSLSYKQLPLLLYQVTRKFRDEPRPRF
GLLRGREFYMKDMYSFDVSEEAALQTYSLVCKAYCNIFSRLGLQFLKVQGATGSIGGTLS
HEFQLPSDVGEDRLAICTNCDFSANLEIVKSDEMHCPICKGKLVEKKGIEVGHTFFLGTK
YSSVFKTTVQTADNVPVLAEMGCYGLGVTRILAASIELLSTENAIRWPNLIAPYQVCLIP
PKSGSKADKTTELIEDLHRCVAEAIPQLKEELVLDDRTQFTIGKRLKDADKLGYPFVIVC
GKKALDDPPLFEVCNQTTGETLFLTKEATIDLLRKVHIP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcccattgcatgctgtgcgtcttattcccagaatttcttcctttggaggcttgttgct
gatgatcttcacaaaaaacttcaagaagcatttaatttaacaaaatctggaactgaagct
tcctctatgaatgttaaaatgaatcttaaaatggaacaactttttaaaacaggaaaaata
gtgctgccttgtctggctaattgggtcatttcctgtcaaagacagagttacaggtcttac
tgcaattttcataaaaaacaaaagctttttccacaaatgaacctgcgggatgacactgaa
gcattccaggagagcagatctggagaaccaatgtgtaaaagccaaacattgatgttacag
actggattgatttgtcctgccaaccctggatgctattactatatgccttataccgttcga
gcgatggagaagcttatcaaagttttagaccaagaaatgcaagccataggtggccaaaaa
gtgaacctgcccacgttatgttcaggaaggctctggaaagccagtggaagatgggaattg
atgggtaaagagcttctgcgagtgacagacaggcatagtcaagaatattgtttagggcct
acccatgaagaggccatcacagacctagtagcttctcaaggctccttgtcttacaaacag
cttcctcttttgttgtatcaggtgacaaggaagtttcgagatgagccgagacctcgtttt
gggttactccgtggccgagagttctacatgaaggatatgtatagctttgatgtctctgag
gaggccgcactccagacctattcccttgtgtgtaaagcctattgcaacatattcagccgg
ttggggcttcaatttctgaaagtccaaggagcaacaggaagcattggagggacattgtct
catgaattccagctaccttcggatgtcggtgaggaccgattggcaatatgtaccaactgt
gacttttcagccaatctagagatagtaaagtcagatgagatgcattgccccatttgcaaa
ggaaagctggttgagaagaaaggaattgaagtgggccacacattcttcttgggaacgaaa
tattcttccgtttttaaaactactgttcaaactgctgacaatgtgcctgttctagctgaa
atgggatgttatgggttgggtgtcacccgcatccttgctgcctccattgagttgctttca
acagagaatgccattcgttggccaaacctcatagcaccttatcaggtttgccttattcct
cccaaaagtggcagtaaggcagacaaaacaacagaactcatagaggatttacacaggtgt
gttgctgaagccataccccaactaaaagaagaacttgtgctggatgaccggactcagttc
accattggaaaaaggttaaaagacgctgacaaacttggctatccttttgttatagtatgt
gggaagaaggctttggatgaccctcctctctttgaagtatgcaaccaaaccacgggtgaa
accctattccttaccaaagaggctacaattgacttgctacgtaaagtccacattccctga
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