KEGG   Thamnophis sirtalis (common garter snake): 106542945
Entry
106542945         CDS       T06107                                 
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
tsr  Thamnophis sirtalis (common garter snake)
Pathway
tsr04140  Autophagy - animal
tsr04148  Efferocytosis
tsr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    106542945 (VPS41)
   04148 Efferocytosis
    106542945 (VPS41)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106542945 (VPS41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsr04131]
    106542945 (VPS41)
Membrane trafficking [BR:tsr04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    106542945 (VPS41)
SSDB
Motif
Pfam: TPR_Vps41 zf-RING_Vps41 Clathrin zf_RING_Vps8 zf_RING_Vps8_fungal TPR_PEP5_VPS11 zf-RING_11 zf-RING_2 Vps39_1 zf-RING_5 TPR_7 TPR_19
Other DBs
NCBI-GeneID: 106542945
NCBI-ProteinID: XP_013914291
UniProt: A0A6I9XJV0
LinkDB
Position
Unknown
AA seq 392 aa
MVLHEFLESDYQGFATLIKEWPGNLYNNPVIVHAVLDHLKKDPQNRTLLKTLAELYTYDQ
RYRKALEIYLTLRHKDVFQLIHKHNLFSSIRDKIVLLMEFDSEKAVDMFLDNEDKISIDK
VVEELKDRPELQHVYLHKLFKRDHHKGQKYHEKQISLYAEYDRPNLLPFLKNSTHCPLEM
ALEICQQRLFVEETVYLLSRMGNSRSALKMIMEDLNDVDKAIEFAKEQDDAELWEDLILY
SIDKPPFITGLLNNIGTHVDPILLIHRIKESMKIPNLRDSLVKILQDYNLQILLREGCKK
ILVADTLSLLKKMHRTQMRGVLVDEENICEICLSPILPTDASKSYNVIVFHCRHMFHKEC
FPEPNTESSLHFCNICSAKHRGPGSAILEMKK
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggttctgcatgaatttctagagagcgattatcagggttttgcaacattaattaaagaa
tggcctgggaacctgtacaacaatccagtcattgtccatgctgtattggaccatctgaag
aaagatccacagaacaggacattgctgaaaactctagcagaattgtacacctacgaccag
cgctacagaaaggctcttgaaatttacctcacactgagacataaagatgttttccagctg
atccacaaacacaatcttttcagttccatcagggacaaaattgttctactaatggagttt
gattcagagaaagccgttgacatgtttttggataatgaagacaaaatctctattgataaa
gttgtggaagaattaaaagataggcctgaattgcagcatgtgtatttgcataagctgttc
aagagagatcatcataaaggacaaaagtatcatgagaaacaaatcagtctgtatgctgaa
tacgaccggccgaatttactcccttttttgaaaaatagcacccattgtccattggaaatg
gctcttgaaatttgtcagcaaagattatttgtggaagagactgtttatcttttgagtcga
atgggcaatagtcgaagtgccctgaaaatgatcatggaagacctaaacgatgtagataaa
gctatagagtttgccaaggagcaagatgatgctgaactttgggaagaccttattttgtat
tcaatagacaaacctccttttattacaggcttgttaaacaatatagggactcatgttgat
cctattctcctgattcatcgtattaaggaaagtatgaagattccaaacctgagagattca
ttagtaaagattcttcaggattataatttgcagattttgcttcgagaaggatgcaagaag
attcttgtggctgacactctttcattgttgaaaaaaatgcatcgaacacaaatgcgtgga
gtacttgtggatgaggaaaatatctgtgaaatatgcctttctcctatactgcctacagat
gcatctaaatcttacaatgtaatagtgtttcactgcagacatatgttccacaaagaatgt
tttcctgaacctaacacagaatcttcattacacttctgtaatatttgcagtgctaaacac
cgtggcccaggcagcgccatcttggagatgaaaaaataa

DBGET integrated database retrieval system