Thamnophis sirtalis (common garter snake): 106542971
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Entry
106542971 CDS
T06107
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner
KO
K27412
PCNA-interacting partner
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsr03400
]
106542971 (PARPBP)
DNA repair and recombination proteins [BR:
tsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
106542971 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
106542971 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
DARPP-32
Motif
Other DBs
NCBI-GeneID:
106542971
NCBI-ProteinID:
XP_013914326
UniProt:
A0A6I9XJY8
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MTPLQQSIWNMIKCFRRNWRLFSDSERTTVCGADCMLMALHLSVAEINKKLCGEFKASLS
EVILSWNYFVPDKLGILSENANAPENYIDIRNTYASFLKHCNMMDLVDIYIKCETLGLQI
EPIPSVQLLEFIAGTADLITENNSTNYALSTPTRKINHDKEELPLMVKKILFAYLTLLVN
SKNDLAFAHILNIPDRGLGREAFTDLKHAAQKKQMSIFPMATSFIRVIELGGKGYAPLPT
DPLRTHVKGLSQFIHFIDKLEEIIGEDLDSRHAGGRILSTIKMQLIKGRNSRDPFCQAAE
EVVQDLDLRIKNIISFQHEAVAASATGISPARPKLHSINHDTVYCGRDTVKSLLAVLDEA
ASYPPLSNKALLLFGSEEFGFPSTMLLFKSPTQSRGSSPKALRQRIQMEACEKIKLKQPL
IRSQFACTYKDDQILKPKNQPSSSSPVVTNALQKMATSHIEDRSTSESLNSSLENTTLGT
DSGSICQNGRRRKEIGKLSCQLENKNPKRKLVERMSENVILTNENETPQHIYHKKPKMQV
ICQNSLDSKLKETRKSKKAIPKNKLIIGQAKLTQFFRL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcttcagcaaagcatttggaatatgattaaatgtttccggagaaattggcgc
ttattttcagattcagaaaggactacagtatgtggggcagattgtatgctgatggctttg
cacttatctgttgcggaaattaataagaagctttgtggtgagtttaaagcatctcttagt
gaagtgatactatcttggaattactttgttcctgacaaattaggtatattatctgaaaat
gcaaacgctcctgaaaattatatagacatcagaaatacctatgctagctttttaaagcac
tgcaatatgatggatcttgtagatatatatataaaatgtgagacactaggactgcaaatt
gaacctataccttctgtacaattgttagaatttattgctggaacagcagatttaataacc
gagaacaattctactaattatgcactctccacaccaacgaggaaaataaaccacgataag
gaagagctgccattgatggtgaagaaaattttgtttgcatatttaaccttattggttaat
tccaaaaatgatttggcttttgctcacattttaaacattcctgacagaggacttggaaga
gaggcttttactgacctaaagcatgctgcccagaagaaacaaatgtctatatttccgatg
gcaacttcatttatacgtgtcatagaacttggaggaaaaggatatgctcctttaccaact
gatcctttaagaactcatgtgaaggggctttctcagtttattcactttattgataaatta
gaagaaattattggtgaagatctggattcaagacatgcagggggccgaatcctatcaaca
atcaagatgcagttgataaaaggccgaaacagcagggatcctttctgtcaagcagcagag
gaagttgtacaagatttggatttgaggattaaaaatattatcagttttcagcatgaggct
gtggcagccagcgctactggaatcagtccagcccgaccaaaactacattctataaaccac
gacactgtttactgtggcagagatactgtgaagtccttattggctgttttagatgaagca
gctagttatcctcctctcagcaacaaagctctcctgttatttggaagtgaagaatttgga
tttccttctaccatgttattgttcaaatctccaacacagtccaggggatcttctcccaaa
gctctgagacaacggattcaaatggaagcgtgtgaaaaaatcaagttgaagcaaccttta
attagatctcagtttgcttgcacttataaagatgaccaaatactcaagccaaagaatcaa
ccctccagttcatctccggtcgtaacaaatgcactccaaaaaatggcaacttctcatatt
gaagacagatcaacttcagaaagcctgaattcatcacttgaaaatactacactcggaact
gattctggaagtatttgtcagaatggaaggagaagaaaagaaataggaaaattaagttgc
cagctagaaaacaagaacccaaagagaaagctggtggaaagaatgagtgaaaatgtcata
ttgactaatgaaaatgaaacaccacagcatatataccataagaaaccaaagatgcaagtg
atatgccaaaatagtttggacagcaaactaaaagaaaccagaaaatccaaaaaggctata
cccaaaaataagcttattattggacaagcgaaactcactcagttctttaggttgtaa
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integrated database retrieval system
