Thamnophis sirtalis (common garter snake): 106543028
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Entry
106543028 CDS
T06107
Symbol
HDX
Name
(RefSeq) highly divergent homeobox
KO
K24884
highly divergent homeobox
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsr03000
]
106543028 (HDX)
Transcription factors [BR:
tsr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106543028 (HDX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
ZapB_rel
Motif
Other DBs
NCBI-GeneID:
106543028
NCBI-ProteinID:
XP_013914390
UniProt:
A0A6I9Y6Y4
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MNLRSVFTAEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
SKNAMDSGGSPSATASSTLTVPPEVAVQNVVSIARSQSQQSSWTSSNNDVIVTGIYNPAT
SSSRLVSSKQTNSLMSDMHKNSLSRSAGKNDPEFQRQHIAVTRQAPHCKNASLFLGEKTI
ILSRQTSVLNSGNSIYNHTKKSYGGSSVQTAELVLPQKPVLCHRPYKMDQVGCQRLQKPE
HPILASSVPSGQRSNIRDPSCSTHNLEIREVFSLAVTDQSLGGSREKALSTSGEGNCLSI
AMETGDVDDEYAREEELASMGAQIQNYSRLTSTPLRVENPGSVFLGSGRSMGCNSHVLNA
RNLHNNILYHNRDYRLPSRTSLHSTSSTLYSSSHPSRSNLSSHFAASNQLRLSQNQNNYQ
ISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDKGMTSLGSVCREKIEAVAAELN
VDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPAVFSSQSDSSDKSIPIPGDDPLTDIGEDN
DRNDEVSICLSEGSSQEEHNEVLPNEGMGHKEEDHTTVSSDNVKIEIIDDEESDMISNSE
VDQMSSLLDYKNEEVRFIESELEHQKQKYFELQTFTRSLILAVKTDDKDQQQALLADLPP
ELEEMDFNHTSPEPDDTSFSLSSSSEKNALDSL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgcgttctgtatttactgcagaacaacagaggatattgcagcgttactatgaa
aatggaatgacaaatcagagtaaaaattgctttcagctcatattacagtgtgcacaagaa
actaagctggacttcagtgtagtcaggacgtgggttggaaacaaaagaagaaagatgagc
agtaagaacgccatggattctggaggaagcccatccgccacggccagcagcacattgaca
gtgcctccggaagtggctgttcaaaacgtggtcagcatcgcccgttcccagagccagcag
tcctcgtggacgtcctccaacaacgacgtcatagtcactggcatctataacccagctact
tcatccagccgactggtctccagtaaacagactaactccctgatgagcgatatgcataaa
aactccctgtcgaggtccgctgggaagaacgatcccgaattccagcggcaacacatcgcg
gtgacccgccaagctccccactgtaaaaacgcttcgctgttcctgggtgagaaaaccatc
atcctctccaggcaaaccagcgtgctgaattcagggaattctatttataaccacacgaag
aaaagttacggcggctcgtcggttcagacggcggaattagtgttacctcagaagcccgtc
ttgtgccaccggccgtacaaaatggaccaggtgggctgccaacggttgcaaaaaccagag
caccccatccttgcttcctctgttccgtccgggcagagatcgaacattagagatccttcc
tgcagcacccacaatttggaaatccgagaggttttttcattggctgtgaccgaccagtcc
ctgggaggaagccgtgagaaggccctgtcaacttccggagaaggcaattgcctgtctatc
gcgatggaaaccggggatgtggacgacgaatacgccagagaggaagagttggcctccatg
ggtgcccagatacaaaactactcccggttaaccagcacgcccctccgcgtcgagaatccg
ggatccgtttttttgggctcgggcaggagcatgggttgcaattcgcatgtgctgaacgcg
aggaacttgcacaacaatatcttgtatcacaacagagactatcgcttaccttcacggact
tcgttgcatagcacatccagtacgctctatagcagttcccatccatcaagaagtaacctt
tcttctcattttgcagcatccaatcaactaaggctatctcagaaccaaaataattatcag
atttcaggaaaccttactgtgccttggattactgggtgctccaggaaaagagcattacag
gaccgtacacaattcagcgaccgagatttagccacccttaagaaatactgggataaaggc
atgaccagccttgggtcggtttgcagagagaaaattgaagccgtggctgcggaattaaac
gttgactgtgaaatagtaaggacttggatcggaaataggagacggaagtatcgtttgatg
ggcattgaagtccctcccccgcgaggtggccctgccgttttttcgagtcagtctgattcc
agtgataaatcgatacccattccaggcgatgatcccctgactgatataggagaggataat
gacaggaatgatgaagtgtccatctgcttatcggaaggaagctcccaagaagaacacaat
gaagttcttccaaatgaaggcatgggccacaaagaagaggaccacactactgtatcttca
gataatgtgaaaatagaaataatagacgatgaagaaagcgatatgataagtaattctgaa
gtggatcagatgagctctcttctggattacaaaaacgaggaagtaaggttcattgagagt
gaactagagcatcaaaaacagaagtattttgaactccagactttcacgagaagtttgata
cttgctgtgaaaacagatgataaagatcagcagcaggcacttctagccgatttacctcca
gaattggaagagatggatttcaaccatacatctccagaacccgacgatacctcattcagc
ttgtcatcttcatccgaaaaaaatgccttggacagtttgtga
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