Thamnophis sirtalis (common garter snake): 106543041
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Entry
106543041 CDS
T06107
Symbol
TAF15
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
tsr
Thamnophis sirtalis (common garter snake)
Pathway
tsr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106543041 (TAF15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsr03021
]
106543041 (TAF15)
03019 Messenger RNA biogenesis [BR:
tsr03019
]
106543041 (TAF15)
Transcription machinery [BR:
tsr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106543041 (TAF15)
Messenger RNA biogenesis [BR:
tsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106543041 (TAF15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
106543041
NCBI-ProteinID:
XP_013914410
UniProt:
A0A6I9Y6Z2
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MASDSGSFSQSGDQQSYAGYGNQGNQNYAHMPQGYPGYDQSGDTSSYGQSYGSYQGNYQG
NYAQTPTGYGQGSQPGYGGYENQNQSPYNQESYGNPGQQKDLSGRSSYDQKSTYGQPGSY
NQSSSYSQQPGSYDQQQGYSQPQRSFDQQSPYNQQGQQSSYDQQSGYSQNQQPQQSFGQQ
QQSSFNQKPNYSPQQGSYGQNQQSYQTQQKESYGPNMQDDRRDKNRFGDDNRGYGGPRGG
SRFDSDNRNTMSGMSGGDRGGFKNYGGQRDFGPKPDADSESDNSDNNTIFVQGLGEDVSP
EQVADYFKQIGVIKTNKKTGKLMINLYTDKDTGKPKGEATVSFDDPPSAKAAIDWFDGKE
FNGSVIRVSFATRRPEFIRGGGSGGGGGRRGSRGGGFGRGGGFQGRGGEPKSGDWLCPNP
TCGNMNFARRNSCNQCNEPRPDDGRPSGGDFRGRGGFGGDRGFRGRGGRGGGFGGKMGGR
NDFRSDQRNRPY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggattctggaagtttcagtcaatctggggatcagcaaagctatgcagggtat
ggcaatcaaggaaatcaaaattatgcacatatgccacagggatatcccggctatgatcag
agtggagatacttcatcatatgggcaaagctatggaagctatcaaggaaactatcaaggg
aactatgcacagaccccgacaggttatgggcaaggtagccagccaggatatggtggatat
gaaaatcagaaccagagcccgtataaccaggaatcttacggcaatcctgggcagcagaaa
gatttgtcaggcaggtcttcctatgaccagaagtccacctatgggcaaccaggttcatac
aatcagtcttcaagctacagccagcagccagggtcctatgaccaacaacaaggctacagt
caaccgcaaagatcatttgatcaacagtcaccttataaccagcagggacagcaaagctca
tatgaccagcagtcaggttacagccaaaatcagcaacctcagcagagctttgggcagcag
cagcaaagctcattcaaccagaagccaaactacagcccgcaacaaggctcatatggtcag
aaccagcagtcataccagacacaacagaaggaaagctatggacccaacatgcaagatgat
cgccgtgacaaaaatagatttggagacgataaccgaggctatgggggcccacgaggtgga
agcagatttgattctgacaacagaaatactatgtctggcatgagtggtggtgaccgaggt
ggcttcaaaaattatggtggtcaaagggattttgggccaaagccagatgcagattcggag
tctgacaattctgataacaacaccatctttgtacaaggacttggagaagatgtttcacca
gaacaagtggctgattacttcaagcaaataggtgtaattaagacaaacaaaaagacaggc
aaacttatgataaatctatatacagacaaggatactggcaagccaaagggagaagcaaca
gtgtcttttgatgaccctccatctgctaaggctgccattgactggtttgatggaaaagaa
ttcaatggcagtgttatcagggtttccttcgcaaccaggcggccagaattcatccgagga
ggtggtagtggaggtggtggtggacgccgaggttcacgtggagggggctttggaagagga
gggggtttccagggccgaggtggagaacccaaaagtggtgattggctttgtcctaacccg
acctgtggaaatatgaactttgctcgccggaattcctgcaatcagtgtaatgagcccaga
ccggatgatgggcgtccctctggaggagatttccgaggcagaggtggttttggaggtgat
cgggggttcagaggccgtggtggccgtggtggtggcttcggtggcaaaatgggaggaaga
aacgacttcagaagtgatcaacgtaacagaccctactaa
DBGET
integrated database retrieval system
