Thamnophis sirtalis (common garter snake): 106543088
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Entry
106543088 CDS
T06107
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsr04131
]
106543088
03036 Chromosome and associated proteins [BR:
tsr03036
]
106543088
Membrane trafficking [BR:
tsr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
106543088
Chromosome and associated proteins [BR:
tsr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
106543088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
RHG20_PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
106543088
NCBI-ProteinID:
XP_013914471
UniProt:
A0A6I9XKE1
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MTSSQPPKRASLGSEGDLDDAGEAFEFEDSEEEDATRLVVSNARTELGTKGALQDPPLRR
RSSISDDLEPLGGWDAEEALLEDRVPLTTSDSSAHLDCRDLQAQAELVDTVSNGDFSQSG
TRIYTWKRRHSSQGDQFTFPSVDDEVIYDDVPCEKVDLQPCDSERSLIYEDVPHAKLTSQ
EPEDLGWSSSEFESYSEDSADENKANAAHAKPKVSFQPKMTQFMKAAKSGTKDGLEKTKI
AVMRTFLHKKDIPGDSEEEELGFLEVPVSDAKQLPELGPMPEGLNPQQVIRRHILGSIVQ
SERSYVDSLRRILQDYRNPLMEMEPKVLSARKCQVVFFRVKEILQCHSMFQIALSSRVVE
WDSMEKIGDLFVASFSKSMVLDVYSEYVNNFTSAMSLIKKACMTKPAFLEFLKKKQMASL
DRVTLYGLMVKPIQRFPQFILLLQDMLKNTPKGHADRLSLQLALTELETLAEKLNDQKRL
ADQVAEIQQLTKSVSDRSHLHKLLNSGQRQLLFCETLTETVYGDRGQLIKSKERKVFLLN
DVLVCANINFKGQLEISSLVPLGPKYIVKWNAALPQVQVLEVGQESSAKEKDGVAIPNVG
SRKPAPPSQSGHNKVFLGPPRLFQELQDLQKDLAVVQQITLLISTLHGTYQNLNMTVAQD
WCLALQRMMRVKEEEIHSANKCRLRLLLPGKPDKSGRPVSVMVVFITPNPLSKISWVNHL
HLAKIALREENQPGWVCPEEDKKSKAAFWCPILVCHIPAFSSRALDLQLGAAIHSPVQSS
LLGFSAISTSLPQGYLWVGGGQEGAGGQVEIFSLNRSVPRTVRSFPVASQVLCLEYIPER
AEEERSEESPTGADQSFPAQPALCLGLQDGRXEIIGKXLGGGGAWRVGKPPPVCVGHSIV
ILSVXSSFWAGQSNSTCRAWAPEVGGLWDADVEPTILAVGLAPVRTLLTLDDAVWASCGN
QVTVFDAVSLKAQQIFEVHPEEESNVTHMIKAGSGVWMAFSSGSSIRLFHTETLELLQDI
NVATRTTAVLPGQKNVRVTSLLICQGLLWIGTDQGILVLLPVPRLEGIPKITGKGMVSLN
GHCGPVDFLAVAFSTLAPEVLKSDKEDGDGGPLAEDAHPSPGARTSDVSSADSSSTREIR
KKGILLQYRLRSTTHLPGQLLSVRDTPSPAGGNSLEHTEEDGSIYEMADDPDIWVRSRTC
AKESHRKEISSLAVISGGRGYRNFGANGRPPSSSESDSTLLLWQIPLIL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacctcttcccagccccccaaaagagcttcactagggagcgagggggaccttgacgat
gctggagaggcctttgagtttgaagatagcgaagaagaggacgccacccgcctcgtggtg
agcaatgccaggacggagctgggcaccaagggggcactacaggacccgcccctcaggcga
aggtccagcatcagcgatgacctcgagccgttgggtggctgggacgcagaagaggcactc
ctggaggatcgggtccccttgaccacctccgattccagtgcccaccttgattgccgagat
ctacaggcacaggccgaattggtggacaccgtgagcaatggagatttttcccagtccggg
acacgaatctacacctggaagcgaagacattcatctcaaggtgatcagtttaccttcccc
tctgttgacgatgaagtgatttacgatgatgtcccttgcgagaaagtcgatttacagccg
tgtgattcagagagaagtttaatttatgaagatgtccctcacgccaagctcacctcacaa
gagcctgaagatttaggctggagctccagcgaattcgaaagctacagcgaagactcggcc
gacgagaacaaagccaatgcggcccacgccaaacccaaagtttccttccagccaaagatg
acccaattcatgaaagcagccaaaagcggcaccaaggatggtttggaaaagaccaaaatt
gcagtcatgcggactttcctgcataagaaagatattccaggggactccgaagaagaagaa
ttgggcttcctggaggtgccagtttcagatgccaaacagctgcccgagttggggccgatg
cccgaagggttaaaccctcagcaggtgatacgtcgtcacatcctgggctccattgtgcaa
agcgagaggagttatgtggactcgctgagacgcattttacaggattataggaaccccttg
atggagatggagcccaaagtcctcagtgccaggaaatgccaagtggtcttcttccgggtc
aaagagatcctccagtgccactccatgttccaaatcgccttgtcttcacgggtggttgag
tgggactccatggagaagatcggtgacctcttcgtggcctcgttctccaagtccatggtc
ttggatgtgtacagtgaatacgtcaacaacttcaccagtgctatgtccttaatcaagaag
gcctgcatgaccaaaccagctttcttggagttcctcaagaagaaacagatggccagcctt
gaccgagtcaccctctacggcttgatggtgaaacccattcaaagattcccccagtttatt
cttctgctccaggatatgctgaagaacaccccaaaaggacacgctgaccggttgtccctc
cagctcgccctaaccgaactggagaccttggctgagaagctgaacgaccagaagaggttg
gccgaccaggtggctgagatccagcagctaaccaagagcgtcagcgaccgcagccatctc
cataagttattaaattcggggcaacggcagctcttattctgcgagaccctgacggagacc
gtttatggcgaccgaggtcaacttatcaaatccaaggaacggaaggtgtttcttttgaat
gacgtgttagtctgcgccaacatcaacttcaaggggcagctagagatcagcagtctggtc
cctctggggcccaagtacattgtgaagtggaacgcagccttgccccaggttcaggtccta
gaggtggggcaggagagcagcgccaaggagaaagacggcgtcgccatcccaaacgtgggc
tctaggaaaccggcaccacccagccagtctggccacaataaagtttttctggggcctcct
cgcctgtttcaagagctgcaagacctgcaaaaggatttggccgtagtgcaacagatcact
cttttaatcagcaccctccatggcacctaccagaacctgaacatgacggtggcccaagac
tggtgtttagctctgcagaggatgatgagggtgaaggaagaggagatccactcggccaac
aagtgccgcctccgtctcttacttcctgggaagcccgacaagtccggtcgccccgtcagc
gtcatggtggtgttcatcacacccaacccactcagcaaaatttcctgggtgaatcatttg
cacttggccaaaattgccctccgagaagaaaaccagcctgggtgggtctgccccgaagaa
gacaagaagagcaaagccgctttctggtgtcccattttggtctgtcacatccctgccttc
tcctccagggccctcgacctgcagctgggggcggccatacacagccccgtccagtcttcc
ttgctgggattctcggccatcagcacttctctgccacagggctacctatgggttggagga
ggtcaggagggcgccgggggtcaagtggagatattttccctgaaccggtcagtgcctcgt
acggtcagatccttcccggtggcctcacaggttctctgcttggagtacatccccgaaaga
gccgaagaggagcgatccgaggagtctccaaccggggctgaccagtcgtttccagctcag
cctgccctctgccttggcctgcaggatggcaggtgagaaatcatcgggaaatgattgggg
ggaggaggggcttggagagttgggaagccccctcctgtctgtgtaggacactccattgtg
atattgtctgtttagtcttccttttgggctggtcagtcgaattccacctgcagagcctgg
gcaccagaggtgggaggcctgtgggacgccgacgttgagcccaccatcctggcggttggg
ctggcccccgtgcggacgctgctcaccttggatgatgccgtatgggccagctgtggcaat
caggtcaccgtcttcgatgccgtcagcctgaaggctcagcaaatattcgaggtccacccg
gaagaggagagcaacgtgacccatatgatcaaggcaggcagtggggtgtggatggccttc
tcctcggggtcttccatacgtctcttccacacggagacgctggagcttctgcaggacatc
aacgtggctacccgaactacagcggttctcccagggcagaagaacgtccgagtcaccagc
ctcctcatatgccagggcctgctctggattggcaccgaccaaggcattctggtcctgttg
cccgtgcccaggctggaggggatccccaaaatcacagggaaggggatggtctcgctcaat
ggccactgcggccctgtggacttcctggcggtggccttcagcactctggctcccgaggtc
ttgaagagcgacaaagaagatggagacggagggccattggcggaggacgcacaccccagc
ccgggagctcgcacctccgatgtgtcctccgcggacagttcctccacccgggaaatccgt
aaaaagggcatccttctgcagtaccggctccgatccacgactcacctacccggacagttg
ctctccgtgagggacacgccttcgccagccggcgggaattctttggaacacaccgaggaa
gacggctccatctacgaaatggcggacgatccggacatctgggtgcgaagccggacgtgc
gcgaaggagtctcaccggaaggagatctcttccctggctgtgatttcgggaggaaggggt
taccgcaacttcggcgccaacggccggcccccgtcgagcagcgaaagtgacagcacgtta
ctcctctggcaaatcccgttgattttatag
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