Thamnophis sirtalis (common garter snake): 106543161
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Entry
106543161 CDS
T06107
Symbol
CLCNKA
Name
(RefSeq) chloride channel protein ClC-Ka
KO
K05017
chloride channel Ka
Organism
tsr
Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:
tsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tsr04040
]
106543161 (CLCNKA)
Ion channels [BR:
tsr04040
]
Chloride channels
Chloride channel (CLC)
106543161 (CLCNKA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
RRN9
Motif
Other DBs
NCBI-GeneID:
106543161
NCBI-ProteinID:
XP_013914554
UniProt:
A0A6I9XFW4
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All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MAAERAEKASGEKERAENKEEEEEANVFLPWEDNWRPWPKARRKVHGCLGCLKRQLFRVG
DDWYYLFALGVIMALLSFAMDFTVSRVARAHLWLYKEVGDYQVLKFLSWTMYPVALSAFS
TGFAQSITQHAGGSGIPELKTILTGVILEEYLAMENFGAKVVGLTCTLACGSTIFLGKVG
PFVHLSSIIAAYLGKIRTSISGEYENKSKQNEMLVAGAAVGVATVFGAPISGVLFSIEVV
SSHFAVRDYWRGFFSATCGAFMFRLLAVFNSEQETITALFKTSFKIDFPFDLPETVFFTF
LGVICGVLSCAYLFCQRWFLGYVRRNCFTAKLLATEKPLYSVLVAFLLSSITFPLSLGQF
MASRLSMKDLLTSLLDNRTWSVLSQNVSLDRPPQVDPLNLWQEWWHPDLSIFGTLSIFLV
MKFWMLILATTMPMPAGYFMPVFIYGAAIGRLVGEATALLFPMGITAGGPPSPIIPGAYA
LAGAAAFSGSVTHTLSTALLAFEMTGQIAHILPVLLAVLVANAIAQKFQPSFYDGTILVK
KLPYLPRIRSRHIESYLVTTQEFMNTDFVILPQEASFHDILQVVTMTDAQEYPVVDNTES
QMLLGVIQRSSLIQFLQSHEDSSLPQEETGKELTSGQTLKEGCMINPVTLQLSPWTSLHQ
AHNLFEMLNLQRAFVTQLGKVVGIVTRRELRKAIEELANPKAGR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagagggcagagaaagccagcggggagaaagagagagccgagaacaaggag
gaggaagaggaggccaatgtgttcctgccttgggaagacaactggagaccctggccaaaa
gcccggcgcaaggtgcacggttgcctggggtgcctcaagcggcagctcttccgagtcggg
gatgattggtattacctctttgccctgggcgtcatcatggcgctgctcagcttcgccatg
gacttcaccgtctccagagttgccagagcacacctgtggctttacaaagaggttggagac
taccaggtgctgaagttcctctcctggaccatgtacccagtcgcactctcggctttttcc
acgggctttgcccaaagcattacccagcacgctggaggctctggcatccccgaactcaag
accatcctgactggcgtcatcctggaggagtacttggccatggagaactttggggccaaa
gtcgtggggctgacctgcacacttgcctgcgggagcaccatcttcctcgggaaagtggga
ccctttgttcacctctccagcataattgctgcctacctgggcaagatccggaccagcatt
tctggggagtacgagaataaaagcaagcagaacgagatgctggtggcaggagcggccgtg
ggcgtggcaaccgtctttggggcacccatcagcggggtcctcttcagcatcgaggtcgta
tcctcccactttgccgtccgggattactggaggggcttcttctcggccacttgtggcgcc
ttcatgttccgcctgttggctgttttcaacagtgaacaagaaaccatcacagccctcttc
aagaccagtttcaaaattgatttcccctttgatctgccggagactgttttcttcacattc
ctcggcgtgatctgtggcgtgctgagctgtgcgtacctcttctgccagcgctggttcctg
ggctatgtccggaggaactgcttcacggccaagctgctagccaccgagaaacccctctat
tcggtgctggtggccttcctgctgtcctccatcaccttcccccttagcctgggacaattc
atggcctccaggctgagcatgaaggatctgctcacctccttgctcgataaccgcacctgg
agtgtcctctcccagaacgtgtcacttgacaggcctccccaggtggaccccctcaaccta
tggcaggagtggtggcaccccgacctctccatcttcggcacgctgtctatcttcctggtg
atgaagttctggatgctgatcttggccaccaccatgcctatgcccgccgggtacttcatg
cccgtcttcatttacggagctgccatcgggcgattggtgggtgaagccacagccctcctc
ttccccatgggcatcactgcggggggccctcctagccccattatccctggggcgtatgcg
ctggcaggggctgctgccttctctggctcagtcacccacaccctctccaccgccttgctg
gcctttgagatgactgggcagattgcccacatcctgcctgtgctgctggccgtcctggtg
gccaacgccattgcccagaagttccagccttccttctacgatggcaccatccttgtcaag
aagctaccgtaccttcctcgcatccgcagcaggcatatcgagtcctacctggtcaccacc
caggagttcatgaatacagatttcgtcatcctgccccaggaagcctccttccatgacatc
ctccaggtggttaccatgacggatgcccaggagtatccggtggtcgacaatactgagtct
cagatgctgctgggggtgatccagcggtccagtctcatccagtttctccagagccacgaa
gactccagtctgccacaggaggagacggggaaagagcttacctcgggccagactttaaaa
gaaggctgcatgataaatcctgtcaccctgcagctctccccatggacatccctgcaccag
gcccacaacctctttgagatgctgaacctgcagcgggcttttgtcacacagctggggaaa
gtggtaggaatcgtgaccaggagggagctcaggaaagccatcgaagagctggccaacccc
aaagctggtcgatag
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